Evidence map›Paper›PMID 11980932›Full record

ArticleJournal of clinical microbiology2002

Multilocus sequence typing for characterization of clinical and environmental salmonella strains.

Mamuka Kotetishvili, O Colin Stine, Arnold Kreger, J Glenn Morris, Alexander Sulakvelidze

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
24.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 190 citations in OpenAlex.

  1. Article
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  5. Multilocus sequence typing of multidrug-resistant Salmonella strains circulating in poultry farms of Bangladesh.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2021
    Article
  6. Review
  7. Article
  8. Genetic diversity ofAIMS microbiology · 2020
    Review
  9. Article
  10. Article
  11. Article
  12. Quantifying the Survival of Multiple Salmonella enterica SerovarsApplied and environmental microbiology · 2018
    Article
  13. A simplified multiplex PCR-based typing method for commonThe Indian journal of medical research · 2017
    Article
  14. Phenotypic and Genotypic Eligible Methods forFrontiers in microbiology · 2017
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Mamuka KotetishviliDivision of Molecular Epidemiology, Department of Epidemiology and Preventive Medicine, University of Maryland School of Medicine, 10 South Pine Street, Baltimore, MD 21201, USA.
O Colin Stine
Arnold Kreger
J Glenn Morris
Alexander Sulakvelidze
University of Maryland, Baltimore · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multilocus sequence typing (MLST) based on the 16S RNA, pduF, glnA, and manB genes was developed for Salmonella, and its discriminatory ability was compared to those of pulsed-field gel electrophoresis (PFGE) and serotyping. PFGE differentiated several strains undifferentiable by serotyping, and 78 distinct PFGE types were identified among 231 Salmonella isolates grouped into 22 serotypes and 12 strains of undetermined serotype. The strains of several PFGE types were further differentiated by MLST, which suggests that the discriminatory ability of MLST for the typing of Salmonella is better than that of serotyping and/or PFGE typing. manB-based sequence typing identified two distinct genetic clusters containing 32 of 54 (59%) clinical isolates whose manB gene sequences were analyzed. The G+C contents and Splitstree analysis of the manB, glnA, and pduF genes of Salmonella indicated that the genes differ in their evolutionary origins and that recombination played a significant role in their evolution.

Indexed as

AnimalsBase SequenceDNA PrimersElectrophoresis, Gel, Pulsed-FieldGenes, BacterialHumansMolecular Sequence DataPhylogenyPolymorphism, GeneticPoultryRNA, Ribosomal, 16SSalmonellaSerotypingDNA PrimersRNA, Ribosomal, 16S

Identifiers

PMID11980932
PMCPMC130929
OpenAlexW2119730621

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.