Evidence map›Paper›PMID 11971144›Full record

ArticleThe Plant cell2002

Genome-wide analysis of core cell cycle genes in Arabidopsis.

Klaas Vandepoele, Jeroen Raes, Lieven De Veylder, Pierre Rouzé, Stephane Rombauts, Dirk Inzé

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 263 papers.

0numbers the graph read from it
0cells of the map it votes in
263citing papers in PubMed
57.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

263 citing papers in PubMed, 593 citations in OpenAlex.

  1. Different Dynamics:Biology · 2026
    Article
  2. Article
  3. Article
  4. Cell cycle in plant development and reprogramming.Development (Cambridge, England) · 2026
    Review
  5. Genome Wide Identification and Characterization ofInternational journal of genomics · 2026
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  6. Review
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  9. Mitotic Disruption and Cytoskeletal Alterations Induced byInternational journal of molecular sciences · 2025
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  10. Review
  11. Article
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  13. Article
  14. Article
  15. Article
  16. PsmiR159b-Horticulture research · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Genetic mapping reveals a candidate geneFrontiers in plant science · 2024
    Article

203 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Klaas VandepoeleDepartment of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology (VIB), Ghent University, K.L. Ledeganckstraat 35, B-9000 Ghent, Belgium.
Jeroen Raes
Lieven De Veylder
Pierre Rouzé
Stephane Rombauts
Dirk Inzé
Ghent University · BEVlaams Instituut voor Biotechnologie · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyclin-dependent kinases and cyclins regulate with the help of different interacting proteins the progression through the eukaryotic cell cycle. A high-quality, homology-based annotation protocol was applied to determine the core cell cycle genes in the recently completed Arabidopsis genome sequence. In total, 61 genes were identified belonging to seven selected families of cell cycle regulators, for which 30 are new or corrections of the existing annotation. A new class of putative cell cycle regulators was found that probably are competitors of E2F/DP transcription factors, which mediate the G1-to-S progression. In addition, the existing nomenclature for cell cycle genes of Arabidopsis was updated, and the physical positions of all genes were compared with segmentally duplicated blocks in the genome, showing that 22 core cell cycle genes emerged through block duplications. This genome-wide analysis illustrates the complexity of the plant cell cycle machinery and provides a tool for elucidating the function of new family members in the future.

Indexed as

Genome, PlantAmino Acid SequenceArabidopsisCarrier ProteinsCell Cycle ProteinsCyclin-Dependent KinasesCyclinsMolecular Sequence DataPhylogenySequence Homology, Amino AcidTerminology as TopicCarrier ProteinsCell Cycle ProteinsCyclin-Dependent KinasesCyclins

Identifiers

PMID11971144
PMCPMC150691
OpenAlexW2116163614

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.