Evidence map›Paper›PMID 11955285›Full record

ArticleThe Biochemical journal2002

Localization and function of a calmodulin-apocalmodulin-binding domain in the N-terminal part of the type 1 inositol 1,4,5-trisphosphate receptor.

Ilse Sienaert, Nael Nadif Kasri, Sara Vanlingen, Jan B Parys, Geert Callewaert, Ludwig Missiaen, Humbert de Smedt

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 76 citations in OpenAlex.

  1. Review
  2. Calmodulin Mutations in Human Disease.Channels (Austin, Tex.) · 2023
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. IPCellular and molecular life sciences : CMLS · 2017
    Review
  8. Article
  9. Article
  10. IP(3) receptors: toward understanding their activation.Cold Spring Harbor perspectives in biology · 2010
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ilse SienaertLaboratorium voor Fysiologie, Katholieke Universiteit Leuven Campus Gasthuisberg O/N, Herestraat 49, B-3000 Leuven, Belgium. Ile.Sienaert@med.kuleuven.ac.be
Nael Nadif Kasri
Sara Vanlingen
Jan B Parys
Geert Callewaert
Ludwig Missiaen
Humbert de Smedt
KU Leuven · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calmodulin (CaM) is a ubiquitous protein that plays a critical role in regulating cellular functions by altering the activity of a large number of proteins, including the d-myo-inositol 1,4,5-trisphosphate (IP3) receptor (IP3R). CaM inhibits IP3 binding in both the presence and absence of Ca2+ and IP3-induced Ca2+ release in the presence of Ca2+. We have now mapped and characterized a Ca2+-independent CaM-binding site in the N-terminal part of the type 1 IP3R (IP3R1). This site could be responsible for the inhibitory effects of CaM on IP3 binding. We therefore expressed the N-terminal 581 amino acids of IP3R1 as a His-tagged recombinant protein, containing the functional IP3-binding pocket. We showed that CaM, both in the presence and absence of Ca2+, inhibited IP3 binding to this recombinant protein with an IC50 of approx. 2 microM. Deletion of the N-terminal 225 amino acids completely abolished the effects of both Ca2+ and CaM on IP3 binding. We mapped the Ca2+-independent CaM-binding site to a recombinant glutathione S-transferase fusion protein containing the first 159 amino acids of IP3R1 and then made different synthetic peptides overlapping this region. We demonstrated that two synthetic peptides matching amino acids 49-81 and 106-128 bound CaM independently of Ca2+ and could reverse the inhibition of IP3 binding caused by CaM. This suggests that these sequences are components of a discontinuous Ca2+-independent CaM-binding domain, which is probably involved in the inhibition of IP3 binding by CaM.

Indexed as

AnimalsApoproteinsBase SequenceBinding SitesCalcium-Binding ProteinsCalmodulinDNA-Binding ProteinsDNA, ComplementaryIn Vitro TechniquesLigandsMiceMicrofilament ProteinsMutagenesis, Site-DirectedPoint MutationProtein BindingProtein Structure, TertiaryAIF1 protein, humanApoproteinsCalcium-Binding ProteinsCalmodulinDNA-Binding ProteinsDNA, ComplementaryLigandsMicrofilament ProteinsRecombinant Fusion Proteins

Identifiers

PMID11955285
PMCPMC1222651
OpenAlexW2047706128

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.