Evidence map›Paper›PMID 11936849›Full record

ArticleMolecular and cellular biochemistry2002

The characterization and purification of a human transcription factor modulating the glutathione peroxidase gene in response to oxygen tension.

Frank Merante, Svetlana M Altamentova, Donald A G Mickle, Richard D Weisel, Bradley J Thatcher, Brian M Martin, John G Marshall, Laura C Tumiati, Douglas B Cowan, Ren-Ke Li

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular and cellular biochemistry, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Frank MeranteTm Bioscience Corporation, Toronto, Ontario, Canada.
Svetlana M Altamentova
Donald A G Mickle
Richard D Weisel
Bradley J Thatcher
Brian M Martin
John G Marshall
Laura C Tumiati
Douglas B Cowan
Ren-Ke Li
National Institutes of Health · USToronto General Hospital · CAUniversity of Toronto · CA

Funding

Neuropsychiatric Disorders--protein Structure/activity StudiesZIAMH002344 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI MARTIN, BRIAN M · 2009 to 2014
$835k
NEUROPSYCHIATRIC DISORDERS--PROTEIN STRUCTURE/ACTIVITY STUDIESZ01MH002344 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI MARTIN, BRIAN M · 1986 to 2008
$469k
6 · The paper itself

Abstract

An oxygen responsive transcription factor regulating human glutathione peroxidase gene (GPx) through two oxygen responsive elements (ORE I and ORE2) has been purified and characterized by sequence-specific DNA affinity chromatography. The DNA binding activity, termed Oxygen Responsive Element Binding Protein (OREBP), was partially represented by a 77 kD polypeptide (p70) possessing a blocked N-terminus. The p70 subunit co-eluted with an 86 kD subunit (p80) from affinity columns. N-terminal sequencing analysis of the 86 kD component revealed that this protein represented the larger member of the Ku antigen complex. The identity of the purified 77 kD subunit was determined by Western blot analysis using an antibody directed against the p70 protein. In addition to binding the GPx-ORE, the OREBP was itself regulated by oxygen tension. It was found that the abundance of the ORE binding activity was decreased in cells maintained at low oxygen tension (40 mm Hg). Anti-Ku-antibodies specifically supershifted the OREBP-ORE DNA complex. These observations further add to the numerous nuclear roles of the Ku-transcription factor.

Indexed as

Antigens, NuclearDNA HelicasesGene Expression Regulation, EnzymologicAntibodiesBlotting, WesternChromatography, AffinityChromatography, Ion ExchangeDNADNA-Binding ProteinsElectrophoretic Mobility Shift AssayGlutathione PeroxidaseHumansKu AutoantigenNFATC Transcription FactorsNuclear ProteinsOxygenAntibodiesAntigens, NuclearDNADNA-Binding ProteinsDNA HelicasesGlutathione PeroxidaseKu AutoantigenNFATC Transcription FactorsNuclear ProteinsOxygenTranscription FactorsXRCC5 protein, humanXrcc6 protein, human

Identifiers

PMID11936849
OpenAlexW336659045

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.