Evidence map›Paper›PMID 11923423›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2002

A proximal promoter domain containing a homeodomain-binding core motif interacts with multiple transcription factors, including HoxA5 and Phox2 proteins, and critically regulates cell type-specific transcription of the human norepinephrine transporter gene.

Chun-Hyung Kim, Dong-Youn Hwang, Jae-Joon Park, Kwang-Soo Kim

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Chun-Hyung KimMolecular Neurobiology Laboratory, McLean Hospital, Harvard Medical School, Belmont, Massachusetts 02478, USA.
Dong-Youn Hwang
Jae-Joon Park
Kwang-Soo Kim
Harvard University · USMcLean Hospital · US

Funding

Transcriptional regulatory cascade of midbrain dopamine neuron development by PitR01MH048866 · NIMH · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI KIM, KWANG-SOO · 1998 to 2012
$3.7M
TRANSCRIPTIONAL MECHANISMS OF TH GENE EXPRESSIONR29MH048866 · NIMH · WINIFRED MASTERSON BURKE MED RES INST · PI KIM, KWANG-SOO · 1992 to 1996
–
NIMH NIH HHS MH48866NIMH NIH HHS R01 MH048866NIMH NIH HHS R29 MH048866
6 · The paper itself

Abstract

Expression of the norepinephrine transporter (NET), which mediates the reuptake of norepinephrine into presynaptic nerve terminals, is restricted to noradrenergic (NA) neurons. We have demonstrated previously that the 9.0 kb upstream sequences and the first intron residing in the 5' untranslated area are critical for high-level and NA cell-specific transcription. Here, using transient transfection assays, we show that 4.0 kb of the 5' upstream sequences contains sufficient genetic information to drive reporter gene expression in an NA cell type-specific manner. Three functional domains appear to be potentially important for the regulation of human NET (hNET) gene transcription: an upstream enhancer region at -4.0 to -3.1 kb, a proximal domain at -133 to -75 bp, and a middle silencer region between these two domains. DNase I footprinting analysis of the proximal promoter region shows that a subdomain at -128 to -80 bp is protected in a cell-specific manner. We provide evidence that multiple protein factors interact with the proximal promoter domain to critically regulate the transcriptional activity of the hNET gene. In the middle of this proximal subdomain resides a homeodomain (HD)-binding core motif, which interacts with HD factors, including Phox2a and HoxA5, in an NA-specific manner. Cotransfection analyses suggest that HoxA5 and Phox2a may transactivate the hNET gene promoter. Together with previous studies indicating direct activation of dopamine beta-hydroxylase transcription by Phox2a/2b, the present results support a model whereby Phox2 proteins may coordinately regulate the phenotypic specification of NA neurons by activating both NA biosynthetic and reuptake genes.

Indexed as

5' Untranslated RegionsAmino Acid MotifsCell LineEpithelial CellsGene Expression RegulationGenes, RegulatorGenes, ReporterHomeodomain ProteinsHumansMutagenesis, Site-DirectedNerve Tissue ProteinsNeuroblastomaNorepinephrine Plasma Membrane Transport ProteinsOrgan SpecificityPhosphoproteinsPromoter Regions, Genetic5' Untranslated RegionsHomeodomain ProteinsHOXA5 protein, humanNerve Tissue ProteinsNorepinephrine Plasma Membrane Transport ProteinsPhosphoproteinsPHOX2A protein, humanSLC6A2 protein, humanSymportersTranscription Factors

Identifiers

PMID11923423
PMCPMC6758336
OpenAlexW1740617962

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.