Evidence map›Paper›PMID 11923347›Full record

ArticleJournal of clinical microbiology2002

Usefulness of multilocus sequence typing for characterization of clinical isolates of Candida albicans.

M-E Bougnoux, S Morand, C d'Enfert

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 199 citations in OpenAlex.

  1. Article
  2. Article
  3. Multilocus sequence typing ofOne health (Amsterdam, Netherlands) · 2025
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  7. Genotyping ofCurrent medical mycology · 2022
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  9. Staphylococcus aureus genotype variation among and within periprosthetic joint infections.Journal of orthopaedic research : official publication of the Orthopaedic Research Society · 2022
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  11. Frontiers in medicine · 2022
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  12. Article
  13. Article
  14. Diversity of the diploid sequence type ofNew microbes and new infections · 2020
    Article
  15. Article
  16. Antimicrobial agents and chemotherapy · 2019
    Article
  17. Investigation of Genetic Relationships BetweenFrontiers in microbiology · 2019
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  18. A Predominance of Clade 17Frontiers in microbiology · 2019
    Article
  19. Article
  20. Article

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

M-E BougnouxUnité Microbiologie et Environnement, Institut Pasteur, Paris, France. marie-elisabeth.bougnoux@apr.ap-hop-paris.fr
S Morand
C d'Enfert
Institut Pasteur · FRUniversité de Perpignan · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Molecular characterization of Candida albicans isolates is essential for understanding the epidemiology of nosocomial infections caused by this yeast. Here, we investigated the potential value of multilocus sequence typing (MLST) for characterizing epidemiologically related or unrelated C. albicans strains of various clinical origins. Accordingly, we sequenced the internal regions (loci) of six selected housekeeping genes of 40 C. albicans clinical isolates and 2 reference strains. In all, 68 polymorphic nucleotide sites were identified, of which 65 were found to be heterozygous in at least one isolate. Ten to 24 different genotypes were observed at the different loci, resulting, when combined, in 39 unique genotype combinations or diploid sequence types (DSTs). When MLST was applied to 26 epidemiologically unrelated isolates and the 2 reference strains, it allowed the identification of 27 independent DSTs, thus demonstrating a discriminatory power of 99.7. Using multidimensional scaling together with the minimum spanning tree method to analyze interstrain relationships, we identified six groups of genetically related isolates on the basis of bootstrap values of greater than 900. Application of MLST to 14 epidemiologically related isolates showed that those recovered from patients in the same hospital ward during the same 3 months had specific DSTs, although 73% of these isolates were genetically very close. This suggests that MLST can trace minute variations in the sequences of related isolates. Overall, MLST proved to be a highly discriminatory and stable method for unambiguous characterization of C. albicans.

Indexed as

Bacterial Typing TechniquesSequence Analysis, DNABacterial ProteinsBase SequenceCandida albicansCandidiasisDNA PrimersGenes, BacterialGenotypeHumansReproducibility of ResultsSpecies SpecificityBacterial ProteinsDNA Primers

Identifiers

PMID11923347
PMCPMC140389
OpenAlexW2163005628

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.