Evidence map›Paper›PMID 11918075›Full record

ArticleJournal of computer-aided molecular design2001

High-affinity interactions of ligands at recombinant guinea pig 5HT7 receptors.

R E Wilcox, J E Ragan, R S Pearlman, M Y Brusniak, R M Eglen, D W Bonhaus, T E Tenner, J D Miller

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of computer-aided molecular design, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 13 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

R E WilcoxCollege of Pharmacy, University of Texas at Austin, 78712, USA. wilcoxrich@mail.utexas.edu
J E Ragan
R S Pearlman
M Y Brusniak
R M Eglen
D W Bonhaus
T E Tenner
J D Miller
Austin College · USTexas Tech University · USDiscoveRx (United States) · USRoche (Switzerland) · CHThe University of Texas at Austin · US

Funding

Pilot Project ProgramP30ES007784 · NIEHS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI STROM, SARA S. · 1996 to 2011
$16.4M
ZEITGEBER TRANSDUCTION AND THE AGED CIRCADIAN SYSTEMP01AG011084 · NIA · STANFORD UNIVERSITY · PI EDGAR, DALE M · 1993 to 1997
–
PARTIAL DOPAMINE AGONISTS AS ANTISCHIZOPHRENIC AGENTSR03MH054865 · NIMH · UNIVERSITY OF TEXAS AUSTIN · PI AVALOS, MELVA N · 1995 to 1995
–
DRUG EFFICACY AT DOPAMINE RECEPTORSR03RR008579 · NCRR · UNIVERSITY OF TEXAS AUSTIN · PI WILCOX, RICHARD E. · 1993 to 1993
–
NCRR NIH HHS RR08579NIA NIH HHS AG11084NIEHS NIH HHS ES07784NIMH NIH HHS MH54865
6 · The paper itself

Abstract

The serotonin 5HT7 receptor has been implicated in numerous physiological and pathological processes from circadian rhythms to depression and schizophrenia. Clonal cell lines heterologously expressing recombinant receptors offer good models for understanding drug-receptor interactions and development of quantitative structure-activity relationships (QSAR). Comparative Molecular Field Analysis (CoMFA) is an important modern QSAR procedure that relates the steric and electrostatic fields of a set of aligned compounds to affinity. Here, we utilized CoMFA to predict affinity for a number of high-affinity ligands at the recombinant guinea pig 5HT7 receptor. Using R-lisuride as the template, a final CoMFA model was derived using procedures similar to those of our recent papers. The final cross-validated model accounted for >85% of the variance in the compound affinity data, while the final non-cross validated model accounted for >99% of the variance. Model evaluation was done using cross-validation methods with groups of 5 ligands. Twenty cross-validation runs yielded an average predictive r2(q2) of 0.779 +/- 0.015 (range: 0.669-0.867). Furthermore, 3D-chemical database search queries derived from the model yielded hit lists of promising agents with high structural similarity to the template. Together, these results suggest a possible basis for high-affinity drug action at 5HT7 receptors.

Indexed as

AnimalsCHO CellsComputer SimulationCricetinaeDrug DesignErgolinesGuinea PigsIn Vitro TechniquesKineticsLigandsModels, MolecularProtein ConformationQuantitative Structure-Activity RelationshipReceptors, SerotoninRecombinant ProteinsSerotonin AntagonistsErgolinesLigandsReceptors, SerotoninRecombinant Proteinsserotonin 7 receptorSerotonin Antagonists

Identifiers

PMID11918075
OpenAlexW1491447436

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.