Evidence map›Paper›PMID 11918074›Full record

ArticleJournal of computer-aided molecular design2001

A comparative docking study and the design of potentially selective MMP inhibitors.

S Hanessian, N Moitessier, E Therrien

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Journal of computer-aided molecular design, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Docking and scoring of metallo-beta-lactamases inhibitors.Journal of computer-aided molecular design · 2004
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

S HanessianDepartment of Chemistry, Université de Montréal, QC, Canada. stephen.hanessian@umontreal.ca
N Moitessier
E Therrien

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As part of a program aimed at the design and synthesis of constrained MMP inhibitors, a survey of the reported X-ray and NMR structures of MMP/inhibitor complexes was performed, revealing mutations of key amino acids at different subsites between MMPs. A comparative study of fully automated docking programs AutoDock and DOCK in closely approximating the X-ray crystal structures of ten selected MMP inhibitors was performed. AutoDock proved to be highly reliable, efficient and predictive for a set of inhibitors with less than six atom types.

Indexed as

Drug DesignMatrix Metalloproteinase InhibitorsBinding SitesComputer SimulationCrystallography, X-RayIn Vitro TechniquesMacromolecular SubstancesMagnetic Resonance SpectroscopyMatrix MetalloproteinasesModels, MolecularMutagenesis, Site-DirectedProtease InhibitorsSoftwareThermodynamicsMacromolecular SubstancesMatrix Metalloproteinase InhibitorsMatrix MetalloproteinasesProtease Inhibitors

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.