Evidence map›Paper›PMID 11909945›Full record

ArticleMolecular and cellular biology2002

BP1, a homeodomain-containing isoform of DLX4, represses the beta-globin gene.

Michael B Chase, Sidong Fu, Susanne B Haga, Gregory Davenport, Holly Stevenson, Khanh Do, Doris Morgan, Alex L Mah, Patricia E Berg

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
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  6. Nanostructured gold dsDNA sensor for early detection of breast cancer by beta protein 1 (BPJournal of electroanalytical chemistry (Lausanne, Switzerland) · 2015
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. DLX4 upregulates TWIST and enhances tumor migration, invasion and metastasis.International journal of biological sciences · 2012
    Article
  12. Article
  13. Article
  14. Amplification of the BP1 homeobox gene in breast cancer.Cancer genetics and cytogenetics · 2008
    Article
  15. Distal-less homeobox transcription factors regulate development and maturation of natural killer cells.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  16. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Michael B ChaseDivision of Human Genetics, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.
Sidong Fu
Susanne B Haga
Gregory Davenport
Holly Stevenson
Khanh Do
Doris Morgan
Alex L Mah
Patricia E Berg
George Washington University · USUniversity of Maryland, Baltimore · USWashington University Medical Center · USHahnemann University Hospital · US

Funding

Integrating U.S. Fertility SurveysR01HD053533 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SMOCK, PAMELA J. · 2007 to 2011
$2.6M
REPRESSION OF HBS IN SICKLE CELL ANEMIAR01DK053533 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI BERG, PATRICIA E · 1997 to 2000
$283k
NICHD NIH HHS R01 HD053533NIDDK NIH HHS R01 DK53533
6 · The paper itself

Abstract

In earlier studies we identified a putative repressor of the human beta-globin gene, termed beta protein 1 (BP1), which binds to two silencer DNA sequences upstream of the adult human beta-globin gene and to a negative control region upstream of the adult delta-globin gene. Further studies demonstrated an inverse correlation between the binding affinity of the BP1 protein for the distal beta-globin silencer sequence and the severity of sickle cell anemia, suggesting a possible role for BP1 in determining the production of hemoglobin S. We have now cloned a cDNA expressing the BP1 protein. Sequencing revealed that BP1 is a member of the homeobox gene family and belongs to the subfamily called Distal-less (DLX), genes important in early development. Further analysis showed that BP1 is an isoform of DLX4. BP1 protein has repressor function towards the beta-globin promoter, acting through the two beta-globin DNA silencers, demonstrated in transient transfection assays. Strong BP1 expression is restricted to placenta and kidney tissue, with no expression in 48 other human tissues. BP1 exhibits regulated expression in the human erythroid cell line MB-02, where its expression decreases upon induction of the beta-globin gene. BP1 is thus the first member of the DLX family with known DNA binding sites and a function in globin gene regulation.

Indexed as

Oncogene ProteinsTranscription FactorsAdultAmino Acid SequenceBase SequenceCell LineCloning, MolecularDNA, ComplementaryFemaleGene Expression RegulationGlobinsHomeodomain ProteinsHumansKidneyMaleMolecular Sequence DataDLX4 protein, humanDNA, ComplementaryGlobinsHomeodomain ProteinsOncogene ProteinsProtein IsoformsRepressor ProteinsTranscription Factors

Identifiers

PMID11909945
PMCPMC133721
OpenAlexW2113458879

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.