Evidence map›Paper›PMID 11907272›Full record

ArticleMolecular biology of the cell2002

FBI-1 can stimulate HIV-1 Tat activity and is targeted to a novel subnuclear domain that includes the Tat-P-TEFb-containing nuclear speckles.

P Shannon Pendergrast, Chen Wang, Nouria Hernandez, Sui Huang

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 56 citations in OpenAlex.

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  14. Nuclear speckles.Cold Spring Harbor perspectives in biology · 2011
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

P Shannon PendergrastCold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA. pendergrast@archemix.com
Chen Wang
Nouria Hernandez
Sui Huang
Northwestern University · USCold Spring Harbor Laboratory · USHoward Hughes Medical Institute · US

Funding

PERINUCLEOLAR COMPARTMENT AND CANCERR01CA077560 · NCI · NORTHWESTERN UNIVERSITY · PI HUANG, SUI · 1999 to 2003
$839k
PERINUCLEOLAR COMPARTMENT AND CANCERK01CA074988 · NCI · NORTHWESTERN UNIVERSITY · PI HUANG, SUI · 1997 to 2001
$215k
NCI NIH HHS 1 R01 CA 77560-01A1NCI NIH HHS 5K01 CA74988-03NCI NIH HHS R01 CA077560
6 · The paper itself

Abstract

FBI-1 is a cellular POZ-domain-containing protein that binds to the HIV-1 LTR and associates with the HIV-1 transactivator protein Tat. Here we show that elevated levels of FBI-1 specifically stimulate Tat activity and that this effect is dependent on the same domain of FBI-1 that mediates Tat-FBI-1 association in vivo. FBI-1 also partially colocalizes with Tat and Tat's cellular cofactor, P-TEFb (Cdk9 and cyclin T1), at the splicing-factor-rich nuclear speckle domain. Further, a less-soluble population of FBI-1 distributes in a novel peripheral-speckle pattern of localization as well as in other nuclear regions. This distribution pattern is dependent on the FBI-1 DNA binding domain, on the presence of cellular DNA, and on active transcription. Taken together, these results suggest that FBI-1 is a cellular factor that preferentially associates with active chromatin and that can specifically stimulate Tat-activated HIV-1 transcription.

Indexed as

Transcription FactorsCell NucleusCyclin-Dependent Kinase 9Cyclin-Dependent KinasesCyclinsCyclin TDNA-Binding ProteinsGene Products, tatGenes, ReporterHeLa CellsHumansNucleic Acid ConformationPositive Transcriptional Elongation Factor BPromoter Regions, GeneticProtein Serine-Threonine KinasesProtein Structure, TertiaryCCNT1 protein, humanCDK9 protein, humanCyclin-Dependent Kinase 9Cyclin-Dependent KinasesCyclinsCyclin TDNA-Binding ProteinsGene Products, tatPositive Transcriptional Elongation Factor BProtein Serine-Threonine KinasesTranscription FactorsZBTB7A protein, human

Identifiers

PMID11907272
PMCPMC99609
OpenAlexW2110544738

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.