Evidence map›Paper›PMID 11907139›Full record

ArticleJournal of lipid research2002

Molecular cloning, genomic organization, genetic variations, and characterization of murine sterolin genes Abcg5 and Abcg8.

Kangmo Lu, Mi-Hye Lee, Hongwei Yu, Yuehua Zhou, Shelley A Sandell, Gerald Salen, Shailendra B Patel

Open access · hybridAbstract read
In one paragraph

Article in Journal of lipid research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 64 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. New insights into the role ofLiver research (Beijing, China) · 2017
    Article
  7. Article
  8. Sitosterolemia: diagnosis, investigation, and management.Current atherosclerosis reports · 2014
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Sterolins ABCG5 and ABCG8: regulators of whole body dietary sterols.Pflugers Archiv : European journal of physiology · 2007
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Kangmo LuDivision of Endocrinology, Diabetes, and Medical Genetics, Medical University of South Carolina, Charleston, SC 29403, USA.
Mi-Hye Lee
Hongwei Yu
Yuehua Zhou
Shelley A Sandell
Gerald Salen
Shailendra B Patel
Medical University of South Carolina · USNew Jersey Microsystems (United States) · US

Funding

ZINC AND COPPER METABOLISM IN COLLAGEN DISORDERSM01RR001070 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI REVES, JOSEPH G · 1985 to 2009
$16.3M
GENETIC AND BIOMEDICAL STUDIES OF SITOSTEROLEMIAR01HL060613 · NHLBI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI PATEL, SHAILENDRA BHANUBHAI · 2000 to 2003
$1.5M
NCRR NIH HHS M01 RR001070NCRR NIH HHS MO1 RR01070-25NHLBI NIH HHS HL60616NHLBI NIH HHS R01 HL060613
6 · The paper itself

Abstract

Mammalian physiological processes can distinguish between dietary cholesterol and non-cholesterol, retaining very little of the non-cholesterol in their bodies. We have recently identified two genes, ABCG5 and ABCG8, encoding sterolin-1 and -2 respectively, mutations of which cause the human disease sitosterolemia. We report here the mouse cDNAs and genomic organization of Abcg5 and Abcg8. Both genes are arranged in an unusual head-to-head configuration, and only 140 bases separate their two respective start-transcription sites. A single TATA motif was identified, with no canonical CCAT box present between the two genes. The genes are located on mouse chromosome 17 and this complex spans no more than 40 kb. Expression of both genes is confined to the liver and intestine. For both genes, two different sizes of transcripts were identified which differ in the lengths of their 3' UTRs. Additionally, alternatively spliced forms for Abcg8 were identified, resulting from a CAG repeat at the intron 1 splice-acceptor site, causing a deletion of a glutamine. We screened 20 different mouse strains for polymorphic variants. Although a large number of polymorphic variants were identified, strains reported to show significant differences in cholesterol absorption rates did not show significant genomic variations in Abcg5 or Abcg8.

Indexed as

DNA, ComplementaryGenetic VariationAlternative SplicingAmino Acid SequenceAnimalsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily G, Member 5ATP Binding Cassette Transporter, Subfamily G, Member 8Base SequenceChromosomesCloning, MolecularExonsGene DeletionGlutamineHumansIntronsABCG5 protein, humanABCG5 protein, mouseABCG8 protein, humanABCG8 protein, mouseATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily G, Member 5ATP Binding Cassette Transporter, Subfamily G, Member 8DNA, ComplementaryGlutamineLipoproteinsRNA, Messenger

Identifiers

PMID11907139
PMCPMC1815568
OpenAlexW2252872720

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.