Evidence map›Paper›PMID 11904403›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

Cross-clade inhibition of HIV-1 replication and cytopathology by using RNase P-associated external guide sequences.

Gunter Kraus, Rebeca Geffin, Gina Spruill, Andrea K Young, Rachel Seivright, Diana Cardona, Jennifer Burzawa, H James Hnatyszyn

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Prevalence of chimerism after non-myeloablative hematopoietic stem cell transplantation.Sao Paulo medical journal = Revista paulista de medicina · 2009
    Article
  8. Article
  9. Article
  10. Effective inhibition of Rta expression and lytic replication of Kaposi's sarcoma-associated herpesvirus by human RNase P.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Gunter KrausDepartment of Microbiology, University of Miami, 1550 NW 10th Avenue (R-138), Miami, FL 33136, USA.
Rebeca Geffin
Gina Spruill
Andrea K Young
Rachel Seivright
Diana Cardona
Jennifer Burzawa
H James Hnatyszyn
University of Miami · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNase P complexes have been proposed as a novel RNA-based gene interference strategy to inhibit gene expression in human malignancies and infectious diseases. This approach is based on the sequence-specific design of an external guide sequence (EGS) RNA molecule that can specifically hybridize to almost any complementary target mRNA and facilitate its cleavage by the RNase P enzyme component. We designed a truncated RNase P-associated EGS molecule to specifically recognize the U5 region of HIV-1 mRNA and mediate cleavage of hybridized mRNA by the RNase P enzyme. Genes encoding for this U5-EGS (560) molecule, as well as a U5 EGS (560D) antisense control, were cloned into retroviral plasmids and transferred into a CD4(+) T cell line. Transfected cells were exposed to increasing concentrations of HIV-1 clinical isolates from clades A, B, C, and F. Heterogeneous cultures of CD4(+) T cells expressing the U5 EGS (560) molecule were observed to maintain CD4 levels, were devoid of cytopathology, and did not produce HIV p24 gag antigen through 30 days after exposure to all HIV-1 clades at a multiplicity of infection of 0.01. Identical cells expressing the U5 EGS (560D) antisense control molecule underwent a loss of CD4 expression, produced elevated levels of HIV-1, and formed large syncytia similar to untreated cells. When the viral inoculum was increased at the time of exposure (multiplicity of infection = 0.05), the inhibitory effect of the U5 EGS (560) molecule was overwhelmed, but viral-mediated cytopathology and particle production were delayed compared with control cell populations. Viral replication and cytopathology associated with infection of multiple HIV-1 clades can be effectively inhibited in CD4(+) cells expressing the RNase P-associated U5 EGS (560) molecule.

Indexed as

Cytopathogenic Effect, ViralVirus ReplicationCD4-Positive T-LymphocytesCell LineDNA, ComplementaryDNA, ViralEndoribonucleasesFlow CytometryHIV-1HIV Core Protein p24HumansPlasmidsProvirusesRetroviridaeReverse Transcriptase Polymerase Chain ReactionRibonuclease PDNA, ComplementaryDNA, ViralEndoribonucleasesHIV Core Protein p24Ribonuclease PRNA, CatalyticRNA, Small UntranslatedRPP14 protein, human

Identifiers

PMID11904403
PMCPMC122536
OpenAlexW2038795981

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.