Evidence map›Paper›PMID 11896608›Full record

ArticleOncogene2002

Multiple mutations are common at mouse Aprt in genotoxin-exposed mismatch repair deficient cells.

Chi Y Shin, Isabel Mellon, Mitchell S Turker

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 22 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Chi Y ShinCenter for Research on Occupational and Environmental Toxicology, Oregon Health Sciences University, Portland, Oregon, OR 97201, USA.
Isabel Mellon
Mitchell S Turker
Oregon Health & Science University · USUniversity of Kentucky · US

Funding

TCE reductive dehalogenation by a microbial communityP42ES010338 · NIEHS · OREGON HEALTH & SCIENCE UNIVERSITY · PI SPENCER, PETER S · 2000 to 2007
$8.2M
CANCER, AGING, AND MUTATIONR01CA076528 · NCI · OREGON HEALTH AND SCIENCE UNIVERSITY · PI TURKER, MITCHELL S · 1999 to 2003
$1.0M
THE SPECTRUM OF MUTATION INDUCED BY IONIZING RADIATIONR01CA056383 · NCI · UNIVERSITY OF KENTUCKY · PI TURKER, MITCHELL S · 1992 to 2002
$607k
MECHANISMS OF DNA REPAIR IN ACTIVE GENESR01GM045535 · NIGMS · UNIVERSITY OF KENTUCKY · PI MELLON, ISABEL W · 1996 to 1998
–
MECHANISMS OF DNA REPAIR IN ACTIVE GENESR29GM045535 · NIGMS · UNIVERSITY OF KENTUCKY · PI MELLON, ISABEL W · 1991 to 1995
–
NCI NIH HHS CA56383NCI NIH HHS CA76528NIEHS NIH HHS 1P42 ES10338NIGMS NIH HHS GM45535
6 · The paper itself

Abstract

Mismatch repair deficiency is known to contribute to elevated rates of mutations, particularly at mono- and dinucleotide repeat sequences. However, such repeats are often missing from the coding regions of endogenous genes. To determine the types of mutations that can occur within an endogenous gene lacking highly susceptible repeat sequences, we examined mutagenic events at the 2.3 kb mouse Aprt gene in kidney cell lines derived from mice deficient for the PMS2 and MLH1 mismatch repair proteins. The Aprt mutation rate was increased 33-fold and 3.6-20-fold for Mlh1 and Pms2 null cell lines, respectively, when compared with a wild-type kidney cell line. For the Pms2 null cells this increase resulted from both intragenic events, which were predominantly base-pairs substitutions, and loss of heterozygosity events. Almost all mutations in the Mlh1 null cells were due to base-pair substitutions. A:T-->G:C transitions (54% of small events) were predominant in the Pms2 null cells whereas G:C-->A:T transitions (36%) were the most common base-pair change in the Mlh1 null cells. Interestingly, 4-9% of the spontaneous mutant alleles in the mismatch repair deficient cells exhibited two well-separated base-pair substitution events. The percentage of mutant alleles with two and occasionally three base-pair substitutions increased when the Pms2 and Mlh1 null cells were treated with ultraviolet radiation (15-21%) and when the Mlh1 null cells were treated with hydrogen peroxide (35%). In most cases the distance separating the multiple base-pair substitutions on a given allele was in excess of 100 base-pairs, suggesting that the two mutational events were not linked directly to a single DNA lesion. The significance of these results is discussed with regards to the roles for the PMS2 and MLH1 proteins in preventing spontaneous and genotoxin-related mutations.

Indexed as

Base Pair MismatchDNA RepairDNA Repair EnzymesMutationAdaptor Proteins, Signal TransducingAdenine PhosphoribosyltransferaseAdenosine TriphosphatasesAnimalsCarrier ProteinsCell LineDNA-Binding ProteinsHydrogen PeroxideLoss of HeterozygosityMiceMismatch Repair Endonuclease PMS2MutL Protein Homolog 1Adaptor Proteins, Signal TransducingAdenine PhosphoribosyltransferaseAdenosine TriphosphatasesCarrier ProteinsDNA-Binding ProteinsDNA Repair EnzymesHydrogen PeroxideMismatch Repair Endonuclease PMS2MLH1 protein, humanMlh1 protein, mouseMutL Protein Homolog 1Neoplasm ProteinsNuclear ProteinsPms2 protein, mouse

Identifiers

PMID11896608
OpenAlexW2315715938

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.