Evidence map›Paper›PMID 11895980›Full record

ArticleInfection and immunity2002

Clonal polymorphism of Borrelia burgdorferi strain B31 MI: implications for mutagenesis in an infectious strain background.

Abdallah F Elias, Philip E Stewart, Dorothee Grimm, Melissa J Caimano, Christian H Eggers, Kit Tilly, James L Bono, Darrin R Akins, Justin D Radolf, Tom G Schwan and 1 more

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 253 papers.

0numbers the graph read from it
0cells of the map it votes in
253citing papers in PubMed
10.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

253 citing papers in PubMed, 329 citations in OpenAlex.

  1. Trial
  2. Protective efficacy of mutant strains ofInfection and immunity · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Pathogens (Basel, Switzerland) · 2025
    Article
  9. Article
  10. Journal of bacteriology · 2025
    Article
  11. Article
  12. mBio · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. bioRxiv : the preprint server for biology · 2024
    Article
  18. Article
  19. Article
  20. Article

193 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Abdallah F EliasLaboratory of Human Bacterial Pathogenesis, Rocky Mountain Laboratories, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, Montana 59840, USA. abdallah.elias@charite.de
Philip E Stewart
Dorothee Grimm
Melissa J Caimano
Christian H Eggers
Kit Tilly
James L Bono
Darrin R Akins
Justin D Radolf
Tom G Schwan
Patricia Rosa
National Institute of Allergy and Infectious Diseases · USMicrobial ID (United States) · USNational Institutes of Health · USUConn Health · USUniversity of Oklahoma Health Sciences Center · US

Funding

USE OF 16S RIBOSOMAL DNA SEQUENCING TO EVALUATE NGUP20RR015564 · NCRR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI GILLASPY, ALLISON · 2000 to 2009
$18.5M
RpoS Regulation of Borrelia burgdorferi Genes in vivoR01AI029735 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI CAIMANO, MELISSA J, RADOLF, JUSTIN D · 1990 to 2022
$10.7M
Molecular Genetics Of Infectious Borrelia BurgdorferiZ01AI000917 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI ROSA, PATRICIA A · 2002 to 2008
$2.2M
MOLECULAR BASIS FOR INFECTION BY BORRELIA BURGDORFERIZ01AI000492 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI SCHWAN, TOM · 1987 to 2008
$1.5M
RpoS Regulation of Borrelia burgdorferi Genes in vivoR56AI029735 · NIAID · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI RADOLF, JUSTIN D · 2012 to 2012
$536k
Transformation/Gene Inactivation In Borrelia BurgdorferiZ01AI000549 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI ROSA, PATRICIA A · 1990 to 2001
–
NCRR NIH HHS P20 RR015564NCRR NIH HHS RR-15564NIAID NIH HHS AI-29735NIAID NIH HHS R01 AI029735NIAID NIH HHS R56 AI029735
6 · The paper itself

Abstract

A major obstacle to studying the functions of particular gene products in the mouse-tick infectious cycle of Borrelia burgdorferi has been an inability to knock out genes in pathogenic strains. Here, we investigated conditions for site-directed mutagenesis in B31 MI, the low-passage-number, infectious B. burgdorferi strain whose genome was sequenced. We inactivated several plasmid and chromosomal genes in B31 MI and determined that clones carrying these mutations were not infectious for mice. However, we found extensive heterogeneity among clones and mutants derived from B31 MI based on colony phenotype, growth rate, plasmid content, protein profile, and transformability. Significantly, several B31 MI clones that were not subjected to mutagenesis but that lacked particular plasmids also exhibited defects at various stages in the infectious cycle. Therefore, the high degree of clonal polymorphism within B31 MI complicates the assessment of the contributions of individual genes to the observed phenotypes of the mutants. Our results indicate that B31 MI is not an appropriate strain background for genetic studies in infectious B. burgdorferi, and a well-defined isogenic clone is a prerequisite for targeted mutagenesis. To this end, we derived several wild-type clones from B31 MI that were infectious for mice, and gene inactivation was successful in one of these clones. Due to the instability of the genome with in vitro propagation, careful monitoring of plasmid content of derived mutants and complementation of inactivated genes will be crucial components of genetic studies with this pathogen.

Indexed as

LipoproteinsPolymorphism, GeneticAdaptation, PhysiologicalAnimalsAntigens, SurfaceBacterial Outer Membrane ProteinsBacterial VaccinesBorrelia burgdorferiMutagenesisRabbitsTemperatureTicksTransformation, BacterialAntigens, SurfaceBacterial Outer Membrane ProteinsBacterial VaccinesLipoproteinsOspA protein

Identifiers

PMID11895980
PMCPMC127854
OpenAlexW2111485154

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.