Evidence map›Paper›PMID 11889557›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2002

Molecular characterization and mapping of ATOH7, a human atonal homolog with a predicted role in retinal ganglion cell development.

Nadean L Brown, Susan L Dagenais, Chuan-Min Chen, Tom Glaser

Open access · greenAbstract read
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 2 pooled it
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 2 syntheses or guidelines pooled it, 45 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Nadean L BrownDepartment of Pediatrics at Children's Memorial Institute for Education and Research, Northwestern University Medical School, Chicago, Illinois 60614-3394, USA.
Susan L Dagenais
Chuan-Min Chen
Tom Glaser
University of Michigan–Ann Arbor · USNorthwestern University · US

Funding

INVESTIGATION OF MAMMALIAN RETINAL NEURON DEVELOPMENTR01EY013612 · NEI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BROWN, NADEAN L · 2001 to 2020
$6.0M
Genetic Analysis of Retinal Ganglion Cell Function, Development and DiseaseR01EY014259 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GLASER, THOMAS M. · 2002 to 2013
$2.8M
GENETIC CONTROL OF EYE DEVELOPMENTR01EY011729 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GLASER, THOMAS M · 1997 to 2001
$551k
NEI NIH HHS EY11729NEI NIH HHS R01 EY011729NEI NIH HHS R01 EY013612NEI NIH HHS R01 EY014259
6 · The paper itself

Abstract

The human ATOH7 gene encodes a basic helix-loop-helix (bHLH) transcription factor that is highly similar to Drosophila Atonal within the conserved bHLH domain. The ATOH7 coding region is contained within a single exon. We mapped ATOH7 to Chromosome (Chr) 10q21.3-22.1, a region syntenic to the segment of mouse Chr 10 where Atoh7 (formerly Math5) is located. The evolutionary relationship between ATOH7 and other atonal homologs was investigated using parsimony analysis. A direct comparison of ATH5/7 and ATH1 protein subgroups to Atonal also revealed a nonrandom distribution of amino acid changes across the bHLH domain, which may be related to their separate visual and proprioceptive sensory functions. Among bHLH genes, ATOH7 is most closely related to Atoh7. This sequence conservation extends significantly beyond the coding region. We define blocks of strong homology in flanking human and mouse genomic DNA, which are likely to include cis regulatory elements. Because targeted deletion of Atoh7 causes optic nerve agenesis in mice, we propose ATOH7 as a candidate for human optic nerve aplasia and related clinical syndromes.

Indexed as

Chromosome MappingSequence Analysis, DNAAmino Acid SequenceAnimalsBase SequenceBasic Helix-Loop-Helix ProteinsChromosomes, Human, Pair 10DNA-Binding ProteinsHumansMiceMolecular Sequence DataNerve Tissue ProteinsPhylogenyRetinal Ganglion CellsSyntenyTranscription FactorsATOH1 protein, humanAtoh1 protein, mouseATOH7 protein, humanAtoh7 protein, mouseBasic Helix-Loop-Helix ProteinsDNA-Binding ProteinsNerve Tissue ProteinsTranscription Factors

Identifiers

PMID11889557
PMCPMC2262845
OpenAlexW2148603477

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.