Evidence map›Paper›PMID 11880619›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

A cofactor approach to copper-dependent catalytic antibodies.

Kenneth M Nicholas, Paul Wentworth, Curtis W Harwig, Anita D Wentworth, Asher Shafton, Kim D Janda

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Interfacial metal and antibody recognition.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Kenneth M NicholasDepartment of Chemistry and Biochemistry, University of Oklahoma, Norman, OK 73019, USA. kmnicholas@chemdept.chem.ou.edu
Paul Wentworth
Curtis W Harwig
Anita D Wentworth
Asher Shafton
Kim D Janda
Scripps Research Institute · USUniversity of Oklahoma · US

Funding

CATALYTIC ANTIBODIESR01GM043858 · NIGMS · SCRIPPS RESEARCH INSTITUTE · PI JANDA, KIM D · 1995 to 2002
$459k
CATALYTIC ANTIBODIESR29GM043858 · NIGMS · SCRIPPS RESEARCH INSTITUTE · PI JANDA, KIM D · 1990 to 1994
–
NIGMS NIH HHS GM43858
6 · The paper itself

Abstract

A strategy for the preparation of semisynthetic copper(II)-based catalytic metalloproteins is described in which a metal-binding bis-imidazole cofactor is incorporated into the combining site of the aldolase antibody 38C2. Antibody 38C2 features a large hydrophobic-combining site pocket with a highly nucleophilic lysine residue, Lys(H93), that can be covalently modified. A comparison of several lactone and anhydride reagents shows that the latter are the most effective and general derivatizing agents for the 38C2 Lys residue. A bis-imidazole anhydride (5) was efficiently prepared from N-methyl imidazole. The 38C2-5-Cu conjugate was prepared by either (i) initial derivatization of 38C2 with 5 followed by metallation with CuCl2, or (ii) precoordination of 5 with CuCl2 followed by conjugation with 38C2. The resulting 38C2-5-Cu conjugate was an active catalyst for the hydrolysis of the coordinating picolinate ester 11, following Michaelis-Menten kinetics [kcat(11) = 2.3 min(-1) and Km(11) 2.2 mM] with a rate enhancement [kcat(11)k(uncat)(11)] of 2.1 x 10(5). Comparison of the second-order rate constants of the modified 38C2 and the Cu(II)-bis-imidazolyl complex k(6-CuCl2) gives a rate enhancement of 3.5 x 10(4) in favor of the antibody complex with an effective molarity of 76.7 M, revealing a significant catalytic benefit to the binding of the bis-imidazolyl ligand into 38C2.

Indexed as

AnhydridesAntibodies, CatalyticAntibodies, MonoclonalCopperFructose-Bisphosphate AldolaseImidazolesImmunoglobulin Fab FragmentsKetonesLactonesMolecular StructureAnhydridesAntibodies, CatalyticAntibodies, Monoclonalantibody aldolaseCopperFructose-Bisphosphate AldolaseImidazolesImmunoglobulin Fab FragmentsKetonesLactones

Identifiers

PMID11880619
PMCPMC122402
OpenAlexW2074736432

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.