Evidence map›Paper›PMID 11875757›Full record

ArticleAmerican journal of human genetics2002

The evolutionary origin of human subtelomeric homologies--or where the ends begin.

Christa Lese Martin, Andrew Wong, Alyssa Gross, June Chung, Judy A Fantes, David H Ledbetter

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Subtelomeric Transcription and its Regulation.Journal of molecular biology · 2020
    Review
  5. Deletion in theJournal of the American Society of Nephrology : JASN · 2020
    Article
  6. Dissecting the Vesicular Trafficking Function of IFT Subunits.Frontiers in cell and developmental biology · 2019
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Human subtelomere structure and variation.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2005
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Christa Lese MartinDepartment of Human Genetics, University of Chicago, 920 East 85th Street, Chicago, IL 60637, USA.
Andrew Wong
Alyssa Gross
June Chung
Judy A Fantes
David H Ledbetter
University of Chicago · USUniversity of Edinburgh · GB

Funding

CRYPTIC TELOMERE ABNORMALITIES IN MENTAL RETARDATIONR01HD036715 · NICHD · UNIVERSITY OF CHICAGO · PI LEDBETTER, DAVID H. · 1999 to 2002
$543k
NICHD NIH HHS 5R01 HD 36715-03
6 · The paper itself

Abstract

The subtelomeric regions of human chromosomes are comprised of sequence homologies shared between distinct subsets of chromosomes. In the course of developing a set of unique human telomere clones, we identified many clones containing such shared homologies, characterized by the presence of cross-hybridization signals on one or more telomeres in a fluorescence in situ hybridization (FISH) assay. We studied the evolutionary origin of seven subtelomeric clones by performing comparative FISH analysis on a primate panel that included great apes and Old World monkeys. All clones tested showed a single hybridization site in Old World monkeys that corresponded to one of the orthologous human sites, thus indicating the ancestral origin. The timing of the duplication events varied among the subtelomeric regions, from approximately 5 to approximately 25 million years ago. To examine the origin of and mechanism for one of these subtelomeric duplications, we compared the sequence derived from human 2q13--an ancestral fusion site of two great ape telomeric regions--with its paralogous subtelomeric sequences at 9p and 22q. These paralogous regions share large continuous homologies and contain three genes: RABL2B, forkhead box D4, and COBW-like. Our results provide further evidence for subtelomeric-mediated genomic duplication and demonstrate that these segmental duplications are most likely the result of ancestral unbalanced translocations that have been fixed in the genome during recent primate evolution.

Indexed as

Evolution, MolecularSequence Homology, Nucleic AcidAnimalsCell LineCercopithecidaeChromosomesChromosomes, HumanChromosomes, Human, Pair 2Cloning, MolecularGene DuplicationHominidaeHumansIn Situ Hybridization, FluorescenceMolecular Sequence DataPrimatesTelomere

Identifiers

PMID11875757
PMCPMC379127
OpenAlexW2076536830

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.