Evidence map›Paper›PMID 11871660›Full record

ArticleRNA (New York, N.Y.)2002

Differential localization of nuclear-encoded tRNAs between the cytosol and mitochondrion in Leishmania tarentolae.

Stephen T Kapushoc, Juan D Alfonzo, Larry Simpson

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Mitochondrial RNA quality control in trypanosomes.Wiley interdisciplinary reviews. RNA · 2021
    Review
  3. Review
  4. Article
  5. tRNA biology in mitochondria.International journal of molecular sciences · 2015
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Stephen T KapushocDepartment of Molecular, Cell and Developmental Biology, University of California, Los Angeles 90095-1662, USA.
Juan D Alfonzo
Larry Simpson
University of California, Los Angeles · US

Funding

UCLA TRAINING PROGRAM IN BIOTECHNOLOGYT32GM008375 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI FOX, CHARLES F · 1990 to 1999
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NIGMS NIH HHS T32 GM08375
6 · The paper itself

Abstract

All mitochondrial tRNAs of the kinetoplastid protozoan Leishmania tarentolae are encoded in the nucleus and are imported from the cytosol into the mitochondrion. We previously reported the partitioning of five tRNAs and found that all were shared between the two compartments to different extents. To increase our knowledge of the tRNAs of this organism, and to attempt to understand the signals involved in their subcellular localization, a method to RT-PCR amplify new tRNAs was developed. Various tRNAs were 3' polyadenylated and reverse transcribed with a sequence-tagged primer. The cDNA was tagged by ligation to an anchor oligonucleotide, and the resulting double-tagged cDNA was amplified by PCR. Four new tRNAs were obtained, bringing to 20 the total number of L. tarentolae tRNAs identified to date. The subcellular localization of 17 tRNAs was quantitatively analyzed by two-dimensional gel electrophoresis and northern hybridization. In general, the previously suggested operational classification of tRNAs into three groups (mainly cytosolic, mainly mitochondrial, and shared between the two compartments) is still valid, but the relative abundance of each tRNA in the cytosol or mitochondrion varied greatly as did the level of expression.

Indexed as

AnimalsBase SequenceBiological TransportCell NucleusCloning, MolecularConserved SequenceCytosolElectrophoresis, Gel, Two-DimensionalLeishmaniaMitochondriaMolecular Sequence DataNucleic Acid ConformationReverse Transcriptase Polymerase Chain ReactionRNARNA, MitochondrialRNA, TransferRNARNA, MitochondrialRNA, TransferRNA, Transfer, Glu

Identifiers

PMID11871660
PMCPMC1370229
OpenAlexW2129022165

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.