Evidence map›Paper›PMID 11869898›Full record

ReviewCurrent opinion in immunology2002

Somatic immunoglobulin hypermutation.

Marilyn Diaz, Paolo Casali

Abstract readReview
In one paragraph

Review in Current opinion in immunology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 112 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. IsAb: a computational protocol for antibody design.Briefings in bioinformatics · 2021
    Article
  11. Review of COVID-19 Antibody Therapies.Annual review of biophysics · 2021
    Article
  12. Article
  13. Review
  14. Article
  15. AbRSA: A robust tool for antibody numbering.Protein science : a publication of the Protein Society · 2019
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Marilyn DiazDepartment of Immunology, Imm16, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA. mdiaz@scripps.edu
Paolo Casali
Cornell University · USScripps Research Institute · US

Funding

Immunoglobulin class switch DNA recombinationR01AI045011 · NIAID · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI CASALI, PAOLO · 2000 to 2011
$3.8M
IMMUNOLOGY RESEARCH TRAINING PROGRAMT32AI007621 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI CESARMAN, ETHEL · 1999 to 2014
$3.4M
SOMATIC HYPERMUTATION IN HUMAN B CELLSR01AR040908 · NIAMS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI CASALI, PAOLO · 1992 to 2005
$1.8M
AGING--ANTIBODY RESPONSE TO BACTERIAL AND VIRAL AGSR01AG013910 · NIA · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI CASALI, PAOLO · 1997 to 2001
$687k
Immunoglobulin class switch DNA recombinationR56AI045011 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI CASALI, PAOLO · 2012 to 2012
$523k
NIAID NIH HHS AI 07621NIAID NIH HHS AI 45011NIAID NIH HHS R01 AI045011NIAID NIH HHS R56 AI045011NIAID NIH HHS T32 AI007621NIAMS NIH HHS AR 40908NIAMS NIH HHS R01 AR040908NIA NIH HHS AG 13910PHS HHS T32 A1-07244
6 · The paper itself

Abstract

Immunoglobulin hypermutation provides the structural correlate for the affinity maturation of the antibody response. Characteristic modalities of this mechanism include a preponderance of point-mutations with prevalence of transitions over transversions, and the mutational hotspot RGYW sequence. Recent evidence suggests a mechanism whereby DNA-breaks induce error-prone DNA synthesis in immunoglobulin V(D)J regions by error-prone DNA polymerases. The nature of the targeting mechanism and the trans-factors effecting such breaks and their repair remain to be determined.

Indexed as

Somatic Hypermutation, ImmunoglobulinAnimalsB-LymphocytesDNA DamageDNA-Directed DNA PolymeraseGene Expression Regulation, DevelopmentalGene Rearrangement, B-LymphocyteGene Rearrangement, T-LymphocyteHumansImmunoglobulinsT-LymphocytesDNA-Directed DNA PolymeraseImmunoglobulins

Identifiers

PMID11869898
PMCPMC4621002
OpenAlexW2136960636

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.