Evidence map›Paper›PMID 11867545›Full record

ArticleThe EMBO journal2002

The hepatitis C viral NS3 protein is a processive DNA helicase with cofactor enhanced RNA unwinding.

Phillip S Pang, Eckhard Jankowsky, Paul J Planet, Anna Marie Pyle

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The EMBO journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 110 papers.

0numbers the graph read from it
0cells of the map it votes in
110citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

110 citing papers in PubMed, 214 citations in OpenAlex.

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  6. Regulation of the DEAH/RHA helicase Prp43 by the G-patch factor Pfa1.Proceedings of the National Academy of Sciences of the United States of America · 2022
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50 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 3 countries.

Phillip S PangDepartment of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, USA.
Eckhard Jankowsky
Paul J Planet
Anna Marie Pyle
Columbia University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007367 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI REINER, STEVEN L · 1985 to 2021
$25.1M
MECHANISM OF RNA HELICASE ACTIVITY BY DEXH/D PROTEINSR01GM060620 · NIGMS · YALE UNIVERSITY · PI PYLE, ANNA MARIE · 2000 to 2008
$1.9M
NIGMS NIH HHS 5 T32 GM07367NIGMS NIH HHS R01 GM060620NIGMS NIH HHS R01 GM60620NIGMS NIH HHS T32 GM007367
6 · The paper itself

Abstract

The RNA helicase/protease NS3 plays a central role in the RNA replication of hepatitis C virus (HCV), a cytoplasmic RNA virus that represents a major worldwide health problem. NS3 is, therefore, an important drug target in the effort to combat HCV. Most work has focused on the protease, rather than the helicase, activities of the enzyme. In order to further characterize NS3 helicase activity, we evaluated individual stages of duplex unwinding by NS3 alone and in complex with cofactor NS4A. Despite a putative replicative role in RNA unwinding, we found that NS3 alone is a surprisingly poor helicase on RNA, but that RNA activity is promoted by cofactor NS4A. In contrast, NS3 alone is a highly processive helicase on DNA. Phylogenetic analysis suggests that this robust DNA helicase activity is not vestigial and may have specifically evolved in HCV. Given that HCV has no replicative DNA intermediate, these findings suggest that NS3 may have the capacity to affect host DNA.

Indexed as

Base SequenceDEAD-box RNA HelicasesDNADNA HelicasesEvolution, MolecularHepacivirusHumansMacromolecular SubstancesMolecular Sequence DataNucleoside-TriphosphatasePhylogenyRNA, ViralSerine EndopeptidasesSubstrate SpecificityViral Nonstructural ProteinsViral ProteasesDEAD-box RNA HelicasesDNADNA HelicasesMacromolecular SubstancesNS3 protein, hepatitis C virusNS4 protein, hepatitis C virusNucleoside-TriphosphataseRNA, ViralSerine EndopeptidasesViral Nonstructural ProteinsViral Proteases

Identifiers

PMID11867545
PMCPMC125889
OpenAlexW2041008570

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.