Evidence map›Paper›PMID 11867452›Full record

ArticleBiophysical journal2002

Lateral diffusion coefficients in membranes measured by resonance energy transfer and a new algorithm for diffusion in two dimensions.

Jósef Kuśba, Li Li, Ignacy Gryczynski, Grzegorz Piszczek, Michael Johnson, Joseph R Lakowicz

Abstract read
In one paragraph

Article in Biophysical journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Lateral diffusion contributes to FRET from lanthanide-tagged membrane proteins.Biochemical and biophysical research communications · 2015
    Article
  3. Article
  4. Lipid14: The Amber Lipid Force Field.Journal of chemical theory and computation · 2014
    Article
  5. FRET in Membrane Biophysics: An Overview.Frontiers in physiology · 2011
    Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jósef KuśbaTechnical University of Gdańsk, Faculty of Applied Physics and Mathematics, Gdansk, Poland.
Li Li
Ignacy Gryczynski
Grzegorz Piszczek
Michael Johnson
Joseph R Lakowicz

Funding

DISTANCE DISTRIBUTIONS AND DYNAMICS OF MACROMOLECULESR01GM035154 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE · PI LAKOWICZ, JOSEPH R. · 1985 to 1997
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NCRR NIH HHS RR08119NIGMS NIH HHS GM35154
6 · The paper itself

Abstract

We describe measurements of lateral diffusion in membranes using resonance energy transfer. The donor was a rhenium (Re) metal-ligand complex lipid, which displays a donor decay time near 3 micros. The long donor lifetime resulted in an ability to measure lateral diffusion coefficient below 10(-8) cm(2)/s. The donor decay data were analyzed using a new numerical algorithm for calculation of resonance energy transfer for donors and acceptors randomly distributed in two dimensions. An analytical solution to the diffusion equation in two dimensions is not known, so the equation was solved by the relaxation method in Laplace space. This algorithm allows the donor decay in the absence of energy transfer to be multiexponential. The simulations show that mutual lateral diffusion coefficients of the donor and acceptor on the order of 10(-8) cm(2)/s are readily recovered from the frequency-domain data with donor decay times on the microsecond timescale. Importantly, the lateral diffusion coefficients and acceptor concentrations can be recovered independently despite correlation between these parameters. This algorithm was tested and verified using the donor decays of a long lifetime rhenium lipid donor and a Texas red-lipid acceptor. Lateral diffusion coefficients ranged from 4.4 x 10(-9) cm(2)/s in 1,2-dimyristoyl-sn-glycero-3-[phospho-rac-(1-glycerol)] (DMPG) at 10 degrees C to 1.7 x 10(-7) cm(2)/s in 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC) at 35 degrees C. These results demonstrated the possibility of direct measurements of lateral diffusion coefficients using microsecond decay time luminophores.

Indexed as

DiffusionEnergy TransferAlgorithmsBiophysical PhenomenaBiophysicsCell MembraneLipidsModels, ChemicalModels, StatisticalSpectrophotometryTemperatureTime FactorsLipids

Identifiers

PMID11867452
PMCPMC1301938

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.