Evidence map›Paper›PMID 11861920›Full record

ArticleNucleic acids research2002

UV-induced T-->C transition at a TT photoproduct site is dependent on Saccharomyces cerevisiae polymerase eta in vivo.

Hong Zhang, Wolfram Siede

Abstract read
In one paragraph

Article in Nucleic acids research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Trial
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Hong ZhangDepartment of Radiation Oncology and Winship Cancer Institute, B5111, Emory University School of Medicine, 1365 B Clifton Road NE, Atlanta, GA 30322, USA.
Wolfram Siede

Funding

INTERACTION OF YEAST CHECKPOINT PROTEINS AS DRUG ASSAYR01CA087381 · NCI · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI SIEDE, WOLFRAM · 2000 to 2004
$1.5M
NCI NIH HHS CA87381NCI NIH HHS R01 CA087381
6 · The paper itself

Abstract

UV-induced reversion of the arg4-17 ochre allele in Saccharomyces cerevisiae is largely dependent on translesion polymerase eta (Rad30p), known to bypass cyclobutane-type TT dimers in an error-free fashion. arg4-17 locus reversion was predominantly due to T-->C transition of T127, the 3' T of a TT photoproduct site. This event was at least 20-fold reduced in a rad30 deletion mutant, irrespective of the status of nucleotide excision repair. These data correlate with known properties of 6-4 TT photoproducts and in vitro characteristics of polymerase eta and suggest that polymerase eta plays an important in vivo role in inserting G opposite the 3' T of 6-4 TT photoproducts at this site. Alternatively, an unprecedented error-prone processing of cyclobutane-type photoproducts at this site by polymerase eta must be assumed as the critical mechanism. Whereas photoreactivation results indeed hint at the latter possibility, a possible regulatory influence of reducing the overall UV damage load on the bypass probability of non-cyclobutane-type pyrimidine dimer photoproducts should not be dismissed.

Indexed as

DNA DamageSaccharomyces cerevisiae ProteinsUltraviolet RaysArgininosuccinate LyaseBase SequenceCell DivisionDeoxycytosine NucleotidesDNA-Directed DNA PolymeraseDNA, FungalDNA RepairDose-Response Relationship, RadiationFungal ProteinsMutationNucleic Acid ConformationPyrimidine DimersSaccharomyces cerevisiaeArg4 protein, S cerevisiaeArgininosuccinate LyaseDeoxycytosine NucleotidesDNA-Directed DNA PolymeraseDNA, FungalFungal ProteinsPyrimidine DimersRad30 proteinSaccharomyces cerevisiae ProteinsThymine NucleotidesY-Family DNA Polymerases

Identifiers

PMID11861920
PMCPMC101249

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.