Evidence map›Paper›PMID 11861863›Full record

ArticleJournal of virology2002

Viable human cytomegalovirus recombinant virus with an internal deletion of the IE2 86 gene affects late stages of viral replication.

Veronica Sanchez, Charles L Clark, Judy Y Yen, Roopashree Dwarakanath, Deborah H Spector

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 60 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Veronica SanchezMolecular Biology Section and Center for Molecular Genetics, University of California, San Diego, La Jolla, California 92093-0366, USA.
Charles L Clark
Judy Y Yen
Roopashree Dwarakanath
Deborah H Spector
University of California, San Diego · US

Funding

GENETIC MECHANISMS AND REGULATIONT32GM007240 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMPTON, RANDOLPH Y. · 1985 to 2019
$23.8M
Human Cytomegalovirus Gene ExpressionR01CA034729 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SPECTOR, DEBORAH HYE · 1985 to 2011
$4.8M
DYSREGULATION OF THE CELL CYCLE BY HUMAN CYTOMEGALOVIRUSR01CA073490 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SPECTOR, DEBORAH HYE · 1998 to 2007
$2.8M
NCI NIH HHS CA34729NCI NIH HHS CA73490NCI NIH HHS R01 CA034729NCI NIH HHS R01 CA073490NIGMS NIH HHS T32 GM007240NIGMS NIH HHS T32 GM07240
6 · The paper itself

Abstract

Using bacterial artificial chromosome (BAC) technology, we have constructed and characterized a human cytomegalovirus recombinant virus with a mutation in the exon specific for the major immediate-early region 2 (IE2) gene product. The resulting IE2 86-kDa protein (IE2 86) has an internal deletion of amino acids 136 to 290 and is fused at the carboxy terminus to enhanced green fluorescent protein (EGFP). The deletion also removes the promoter and initiator methionine for the p40 form of IE2 and initiator methionine for the p60 form of the protein, and therefore, these late gene products are not produced. The mutant virus IE2 86 Delta SX-EGFP is viable but exhibits altered growth characteristics in tissue culture compared with a full-length wild-type (wt) IE2 86-EGFP virus or a revertant virus. When cells are infected with the mutant virus at a low multiplicity of infection (MOI), there is a marked delay in the production of infectious virus. This is associated with slower cell-to-cell spread of the virus. By immunofluorescence and Western blot analyses, we show that the early steps in the replication of the mutant virus are comparable to those for the wt. Although there is significantly less IE2 protein in the cells infected with the mutant, there is only a modest lag in the initial accumulation of IE1 72 and viral early proteins, and viral DNA replication proceeds normally. The mutation also has only a small effect on the synthesis of the viral major capsid protein. The most notable molecular defect in the mutant virus infection is that the steady-state levels of the pp65 (UL83) and pp28 (UL99) matrix proteins are greatly reduced. In the case of UL83, but not UL99, there is also a corresponding decrease in the amount of mRNA present in cells infected with the mutant virus.

Indexed as

Gene DeletionMembrane GlycoproteinsRecombination, GeneticTrans-ActivatorsViral Envelope ProteinsVirus ReplicationCells, CulturedChromosomes, Artificial, BacterialCytomegalovirusCytomegalovirus InfectionsFibroblastsHumansImmediate-Early ProteinsPhosphoproteinsViral Matrix ProteinsViral Proteinscytomegalovirus matrix protein 65kDaglycoprotein H, Cytomegalovirusglycoprotein H, Human cytomegalovirusglycoprotein O, cytomegalovirushuman cytomegalovirus protein pp28IE2 protein, CytomegalovirusImmediate-Early ProteinsMembrane GlycoproteinsPhosphoproteinsTrans-ActivatorsUL115 protein, Human herpesvirus 5Viral Envelope ProteinsViral Matrix ProteinsViral Proteins

Identifiers

PMID11861863
PMCPMC135995
OpenAlexW2128309861

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.