Evidence map›Paper›PMID 11854493›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

The carboxyl tail forms a discrete functional domain that blocks closure of the yeast K+ channel.

Stephen H Loukin, Junyu Lin, Umair Athar, Christopher Palmer, Yoshiro Saimi

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. TOK channels use the two gates in classical KFASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Article
  3. Promising Antifungal Targets AgainstFrontiers in cellular and infection microbiology · 2018
    Review
  4. Article
  5. Ion channels in microbes.Physiological reviews · 2008
    Review
  6. Article
  7. Article
  8. Microbial K+ channels.The Journal of general physiology · 2005
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Stephen H LoukinLaboratory of Molecular Biology, University of Wisconsin, Madison, WI 53706, USA. shloukin@facstaff.wisc.edu
Junyu Lin
Umair Athar
Christopher Palmer
Yoshiro Saimi

Funding

Molecular Basis of Hypertonicity Sensing by Yeast Yvc1pR01GM054867 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI KUNG, CHING · 1998 to 2010
$2.2M
NIGMS NIH HHS GM54867NIGMS NIH HHS R01 GM054867
6 · The paper itself

Abstract

Non-targeted mutagenesis studies of the yeast K(+) channel, TOK1, have led to identification of functional domains common to other cation channels as well as those so far not found in other channels. Among the latter is the ability of the carboxyl tail to prevent channel closure. Here, we show that the tail can fulfill this function in trans. Coexpression of the carboxyl tail with the tail-deleted channel core restores normal channel behavior A Ser/Thr-rich region at its amino end and an acidic stretch at its carboxyl end delineate the minimal region required for tail function. This region of 160 aa apparently forms a discrete functional domain. Interaction of this domain with the channel core is strong, being recalcitrant to removal from excised membrane patches by both high salt and reducing agents. Although the use of a cytoplasmic domain to regulate channel is common among animal channels, by using it as a "foot-in-the-door" to maintain open state appears unique to TOK1, the first fungal K(+) channel studied in depth.

Indexed as

Saccharomyces cerevisiae ProteinsAmino Acid SequenceCalciumCytoplasmDimerizationDNAElectrophysiologyGene DeletionModels, BiologicalMolecular Sequence DataMutagenesisPhosphorylationPlasmidsPotassium ChannelsProtein Structure, TertiaryRNACalciumDNAPotassium ChannelsRNASaccharomyces cerevisiae ProteinsTOK1 protein, S cerevisiae

Identifiers

PMID11854493
PMCPMC122296

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.