Evidence map›Paper›PMID 11842210›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

Laser capture microdissection analysis of gene expression in macrophages from atherosclerotic lesions of apolipoprotein E-deficient mice.

Eugene Trogan, Robin P Choudhury, Hayes M Dansky, James X Rong, Jan L Breslow, Edward A Fisher

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 165 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Survey of Approaches for Investigation of Atherosclerosis In Vivo.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Macrophages in Atherosclerosis Regression.Arteriosclerosis, thrombosis, and vascular biology · 2020
    Review
  14. Article
  15. Role of LpL (Lipoprotein Lipase) in Macrophage Polarization In Vitro and In Vivo.Arteriosclerosis, thrombosis, and vascular biology · 2019
    Article
  16. Article
  17. Review
  18. Atherosclerosis in the single-cell era.Current opinion in lipidology · 2018
    Review
  19. Article
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Eugene TroganDepartment of Medicine and The Zena and Michael A. Wiener Cardiovascular Institute, Mount Sinai School of Medicine, New York, NY 10029, USA.
Robin P Choudhury
Hayes M Dansky
James X Rong
Jan L Breslow
Edward A Fisher
Icahn School of Medicine at Mount Sinai · USRockefeller University · US

Funding

TRAINING PROGRAM IN MOLECULAR AND CELLULAR CARDIOLOGYT32HL007824 · NHLBI · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI GELB, BRUCE D · 1995 to 2022
$8.6M
HDL AND PLAQUES--NOVEL MODELS AND IMAGING TECHNIQUESR01HL061814 · NHLBI · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI FISHER, EDWARD A · 1998 to 2001
$678k
ROLE OF APOLIPOPROTEIN GENES IN LIPOPROTEIN METABOLISMR01HL033714 · NHLBI · ROCKEFELLER UNIVERSITY · PI BRESLOW, JAN L · 1985 to 2000
$530k
NHLBI NIH HHS HL07824NHLBI NIH HHS HL33714NHLBI NIH HHS HL-61814NHLBI NIH HHS T32 HL007824
6 · The paper itself

Abstract

Macrophage foam cells are integral in the development of atherosclerotic lesions. Gene expression analysis of lesional macrophage foam cells is complicated by the cellular heterogeneity of atherosclerotic plaque and the presence of lesions of various degrees of severity. To overcome these limitations, we tested the ability of laser capture microdissection (LCM) and real-time quantitative reverse transcription PCR to selectively analyze RNA from lesional macrophages of apolipoprotein E (apoE)-deficient mice. Proximal aortic tissue sections were immunostained for macrophagespecific CD68/macrosialin by a rapid (approximately 15-min) protocol. Alternating sections from each animal were used to isolate RNA either from entire sections (analogous to isolation from whole tissue) or by LCM selection of CD68-positive cells. We measured the mRNA levels of CD68, a macrophage-specific marker, alpha-actin, a smooth muscle cell marker, and cyclophilin A, a control gene. Compared with whole sections, CD68 mRNA levels were greatly enriched (33.6-fold) in the laser-captured lesional macrophages. In contrast to whole sections, LCM-derived RNA had undetectable levels of alpha-actin. To illustrate the ability of this method to measure changes in lesional macrophage gene expression, we injected 100 microg of lipopolysaccharide i.p. into apoE-deficient mice and detected in laser-captured lesional macrophages increased mRNA expression for vascular cell adhesion molecule-1, intercellular cell adhesion molecule-1, and monocyte chemoattractant protein-1 (11.9-, 32.5-, and 31.0-fold, respectively). By selectively enriching foam cell RNA, LCM provides a powerful approach to study the in situ expression and regulation of atherosclerosis-related genes. This approach will allow the study of macrophage gene expression under various conditions of plaque formation, regression, and response to genetic and environmental perturbations.

Indexed as

LasersActinsAnimalsAntigens, CDAntigens, Differentiation, MyelomonocyticAortaApolipoproteins EArteriosclerosisCD68 MoleculeChemokine CCL2Cyclophilin ADissectionFoam CellsGene Expression ProfilingImmunohistochemistryIn Situ HybridizationActinsAntigens, CDAntigens, Differentiation, MyelomonocyticApolipoproteins ECD68 antigen, humanCD68 MoleculeChemokine CCL2Cyclophilin AIntercellular Adhesion Molecule-1RNARNA, MessengerVascular Cell Adhesion Molecule-1

Identifiers

PMID11842210
PMCPMC122348
OpenAlexW2111505871

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.