Evidence map›Paper›PMID 11836427›Full record

ArticleJournal of virology2002

Complete inhibition of tobamovirus multiplication by simultaneous mutations in two homologous host genes.

Takuya Yamanaka, Takahiro Imai, Rena Satoh, Arata Kawashima, Miki Takahashi, Kayo Tomita, Kenji Kubota, Tetsuo Meshi, Satoshi Naito, Masayuki Ishikawa

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
7.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 124 citations in OpenAlex.

  1. Review
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  12. Understanding tobamovirus-plant interactions: implications for breeding resistance to tomato brown rugose fruit virus.Journal of plant pathology : an international journal of the Italian Phytopathological Society · 2023
    Review
  13. Article
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  15. Article
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  17. Article
  18. Identification ofFrontiers in plant science · 2018
    Article
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Takuya YamanakaDivision of Applied Bioscience, Graduate School of Agriculture, Hokkaido University, Sapporo 060-8589, Japan.
Takahiro Imai
Rena Satoh
Arata Kawashima
Miki Takahashi
Kayo Tomita
Kenji Kubota
Tetsuo Meshi
Satoshi Naito
Masayuki Ishikawa
Hokkaido University · JPKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The TOM1 gene of Arabidopsis thaliana encodes a putative multipass transmembrane protein which is necessary for the efficient multiplication of tobamoviruses. We have previously shown that mutations severely destructive to the TOM1 gene reduce tobamovirus multiplication to low levels but do not impair it completely. In this report, we subjected one of the tom1 mutants (tom1-1) to another round of mutagenesis and isolated a new mutant which did not permit a detectable level of tobamovirus multiplication. In addition to tom1-1, this mutant carried a mutation referred to as tom3-1. Positional cloning showed that TOM3 was one of two TOM1-like genes in Arabidopsis. Based on the similarity between the amino acid sequences of TOM1 and TOM3, together with the results of a Sos recruitment assay suggesting that both TOM1 and TOM3 bind tobamovirus-encoded replication proteins, we propose that TOM1 and TOM3 play parallel and essential roles in the replication of tobamoviruses.

Indexed as

MutationViral ProteinsAmino Acid SequenceArabidopsisArabidopsis ProteinsCarrier ProteinsGenetic Complementation TestMembrane ProteinsMolecular Sequence DataPlant DiseasesPlant ProteinsTobamovirusVirus ReplicationArabidopsis ProteinsCarrier ProteinsMembrane ProteinsPlant ProteinsTOM1 protein, ArabidopsisTOM3 protein, ArabidopsisViral Proteins

Identifiers

PMID11836427
PMCPMC135938
OpenAlexW2163682666

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.