Evidence map›Paper›PMID 11836386›Full record

ArticleJournal of virology2002

Selection for c-myc integration sites in polyclonal T-cell lymphomas.

Dana R Broussard, Jennifer A Mertz, M Lozano, Jaquelin P Dudley

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Dana R BroussardSection of Molecular Genetics and Microbiology, Institute for Cellular and Molecular Biology, The University of Texas at Austin, 100 W. 24th Street, Austin, TX 78712, USA.
Jennifer A Mertz
M Lozano
Jaquelin P Dudley
The University of Texas at Austin · US

Funding

THYMUS INFECTION AND IMMUNITY IN VIRAL LEUKEMOGENESISP01CA077760 · NCI · UNIVERSITY OF PENNSYLVANIA · PI ROSS, SUSAN R · 2000 to 2004
$4.4M
TRANSCRIPTIONAL REGULATION AND TUMORIGENESIS BY MMTVR01CA034780 · NCI · UNIVERSITY OF TEXAS AUSTIN · PI DUDLEY, JAQUELIN PAGE · 1985 to 2002
$821k
NCI NIH HHS CA 77760NCI NIH HHS P01 CA077760NCI NIH HHS R01 CA 34780
6 · The paper itself

Abstract

Type B leukemogenic virus (TBLV) is highly related to mouse mammary tumor virus but induces rapidly appearing T-cell lymphomas in mice. Unlike other T-cell tumors induced by retroviruses, only 5 to 10% of TBLV-induced lymphomas have detectable viral integrations near c-myc by Southern blotting, whereas Northern blotting has shown that most tumors have two- to sixfold overexpression of c-myc RNA. In this report, PCR was used to demonstrate that at least 30% of these lymphomas have TBLV insertions near c-myc. Some tumors contained multiple TBLV proviruses in different locations and orientations, suggesting that the tumors are polyclonal. The integrated proviruses near c-myc had different numbers (two to four) of long terminal repeat (LTR) enhancer repeats, although LTRs with three-repeat enhancers dominated the proviral population. Passage of polyclonal tumors in immunocompetent mice and semiquantitative PCR revealed that only cells with particular integrations were selected for growth. In three of six tumors tested, proviruses containing four-repeat enhancers near c-myc were selected during tumor passage. Since tumor cell selection may be accomplished by overexpression of c-myc RNA due to proximity to the unique TBLV LTR enhancer, we inserted LTRs at various locations within a plasmid containing the entire c-myc locus and cellular flanking sequences. To quantitatively measure effects on transcription, the Renilla luciferase gene was substituted for most of c-myc exon 2, and transient transfections were performed with c-myc reporter constructs in two different T-cell lines. As expected, insertion of a TBLV LTR with three-repeat enhancers in either orientation, 5" and 3", of the myc gene elevated reporter activity from 2- to 160-fold, consistent with enhancer function, but four-repeat LTRs had lower levels of expression compared to three-repeat LTRs. Surprisingly, LTR insertions that gave maximal c-myc expression in transient-transfection assays declined in tumor cells selected for growth in vivo. Selection for clonal growth may occur in tumor cells that have modest c-myc overexpression after proviral insertion to prevent apoptosis.

Indexed as

AnimalsBetaretrovirusChromosome MappingEnhancer Elements, GeneticGene Expression Regulation, NeoplasticGenes, mycHumansJurkat CellsLymphoma, T-CellMiceMice, Inbred BALB CMice, Inbred C57BLPolymerase Chain ReactionPromoter Regions, GeneticProto-Oncogene Proteins c-mycRetroviridae InfectionsProto-Oncogene Proteins c-myc

Identifiers

PMID11836386
PMCPMC153816
OpenAlexW2075380097

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.