Evidence map›Paper›PMID 11833004›Full record

ArticleAmerican journal of human genetics2002

Localization of a susceptibility gene for common forms of stroke to 5q12.

Solveig Gretarsdottir, Sigurlaug Sveinbjörnsdottir, Hjörtur H Jonsson, Finnbogi Jakobsson, Elisabet Einarsdottir, Uggi Agnarsson, Dana Shkolny, Gisli Einarsson, Herdis M Gudjonsdottir, Einar M Valdimarsson and 18 more

Abstract read
In one paragraph

Article in American journal of human genetics, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Association between phosphodiesterase 4D gene and ischaemic stroke.Journal of neurology, neurosurgery, and psychiatry · 2006
    Pooled it
  3. Trial
  4. TTC7B emerges as a novel risk factor for ischemic stroke through the convergence of several genome-wide approaches.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2012
    Trial
  5. Review
  6. Article
  7. Article
  8. Article
  9. Pathophysiology of Lacunar Stroke: History's Mysteries and Modern Interpretations.Journal of stroke and cerebrovascular diseases : the official journal of National Stroke Association · 2019
    Review
  10. Article
  11. Alpha-1 antitrypsin dysfunction and large artery stroke.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  12. Article
  13. Association between phosphodiesterase 4D (PDE4D) SNP 87 and ischemic stroke: a meta-analysis.International journal of clinical and experimental medicine · 2015
    Article
  14. Genetics of ischemic stroke in young adults.Circulation. Cardiovascular genetics · 2014
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Genomics of premature atherosclerotic vascular disease.Current atherosclerosis reports · 2010
    Review
  20. The genetics of ischaemic stroke.Journal of internal medicine · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Solveig GretarsdottirdeCODE Genetics, Reykjavik, Iceland.
Sigurlaug Sveinbjörnsdottir
Hjörtur H Jonsson
Finnbogi Jakobsson
Elisabet Einarsdottir
Uggi Agnarsson
Dana Shkolny
Gisli Einarsson
Herdis M Gudjonsdottir
Einar M Valdimarsson
Olafur B Einarsson
Gudmundur Thorgeirsson
Radinka Hadzic
Sif Jonsdottir
Sigridur Th Reynisdottir
Sigrun M Bjarnadottir
Thorunn Gudmundsdottir
Gudrun J Gudlaugsdottir
Ramanjit Gill
Klaus Lindpaintner
Jesus Sainz
Helgi H Hannesson
Gunnar Th Sigurdsson
Michael L Frigge
Augustine Kong
Vilmundur Gudnason
Kari Stefansson
Jeffrey R Gulcher

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stroke is one of the most complex diseases, with several subtypes, as well as secondary risk factors, such as hypertension, hyperlipidemia, and diabetes, which, in turn, have genetic and environmental risk factors of their own. Here, we report the results of a genomewide search for susceptibility genes for the common forms of stroke. We cross-matched a population-based list of patients with stroke in Iceland with an extensive computerized genealogy database clustering 476 patients with stroke within 179 extended pedigrees. Linkage to 5q12 was detected, and the LOD score at this locus meets the criteria for genomewide significance (multipoint allele-sharing LOD score of 4.40, P=3.9 x 10(-6)). A 20-cM region on 5q was physically and genetically mapped to obtain accurate marker order and intermarker distances. This locus on 5q12, which we have designated as "STRK1," does not correspond to known susceptibility loci for stroke or for its risk factors and represents the first mapping of a locus for common stroke.

Indexed as

Genetic Predisposition to DiseaseAllelesChromosome MappingChromosomes, Human, Pair 5Diabetes ComplicationsDiabetes MellitusFemaleGenetic MarkersGenome, HumanHumansHypercholesterolemiaHypertensionIcelandLod ScoreMalePedigreeGenetic Markers

Identifiers

PMID11833004
PMCPMC384939

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.