Evidence map›Paper›PMID 11830665›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

Complementary whole-genome technologies reveal the cellular response to proteasome inhibition by PS-341.

James A Fleming, Eric S Lightcap, Seth Sadis, Vala Thoroddsen, Christine E Bulawa, Ronald K Blackman

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 199 citations in OpenAlex.

  1. Article
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  3. Review
  4. Microbial cell (Graz, Austria) · 2026
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  6. Article
  7. Review
  8. Article
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  11. Regulation and Functions of the ER-Associated Nrf1 Transcription Factor.Cold Spring Harbor perspectives in biology · 2023
    Review
  12. Article
  13. Article
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  15. Article
  16. Article
  17. Article
  18. Ddi1 is a ubiquitin-dependent protease.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  19. Article
  20. Article

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

James A FlemingMillennium Pharmaceuticals, Incorporated, 75 Sidney Street, Cambridge, MA 02139, USA.
Eric S Lightcap
Seth Sadis
Vala Thoroddsen
Christine E Bulawa
Ronald K Blackman
Millennium Engineering and Integration (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although the biochemical targets of most drugs are known, the biological consequences of their actions are typically less well understood. In this study, we have used two whole-genome technologies in Saccharomyces cerevisiae to determine the cellular impact of the proteasome inhibitor PS-341. By combining population genomics, the screening of a comprehensive panel of bar-coded mutant strains, and transcript profiling, we have identified the genes and pathways most affected by proteasome inhibition. Many of these function in regulated protein degradation or a subset of mitotic activities. In addition, we identified Rpn4p as the transcription factor most responsible for the cell's ability to compensate for proteasome inhibition. Used together, these complementary technologies provide a general and powerful means to elucidate the cellular ramifications of drug treatment.

Indexed as

Genome, FungalBoronic AcidsBortezomibCell NucleusCysteine EndopeptidasesDNA, FungalDNA RepairFungal ProteinsGene DeletionGene Expression ProfilingGenomicsMicrobial Sensitivity TestsMultienzyme ComplexesOligonucleotide Array Sequence AnalysisProtease InhibitorsProteasome Endopeptidase ComplexBoronic AcidsBortezomibCysteine EndopeptidasesDNA, FungalFungal ProteinsMultienzyme ComplexesProtease InhibitorsProteasome Endopeptidase ComplexPyrazinesRNA, Fungal

Identifiers

PMID11830665
PMCPMC122213
OpenAlexW2009962604

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.