Evidence map›Paper›PMID 11826299›Full record

ArticleThe Plant cell2002

The gibberellin signaling pathway is regulated by the appearance and disappearance of SLENDER RICE1 in nuclei.

Hironori Itoh, Miyako Ueguchi-Tanaka, Yutaka Sato, Motoyuki Ashikari, Makoto Matsuoka

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The Plant cell, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 219 papers.

0numbers the graph read from it
0cells of the map it votes in
219citing papers in PubMed
38.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

219 citing papers in PubMed, 528 citations in OpenAlex.

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159 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hironori ItohBioScience Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan.
Miyako Ueguchi-Tanaka
Yutaka Sato
Motoyuki Ashikari
Makoto Matsuoka
Nagoya University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The slender rice1 mutant (slr1) shows a constitutive gibberellin (GA) response phenotype. To investigate the mode of action of SLR1, we generated transgenic rice expressing a fusion protein consisting of SLR1 and green fluorescent protein (SLR1-GFP) and analyzed the phenotype of the transformants and the subcellular localization of GFP in vivo. SLR1-GFP worked in nuclei to repress the GA signaling pathway; its overproduction caused a dwarf phenotype. Application of GA(3) to SLR1-GFP overproducers induced GA actions such as shoot elongation, downregulation of GA 20-oxidase expression, and upregulation of SLR1 expression linked with the disappearance of the nuclear SLR1-GFP protein. We also performed domain analyses of SLR1 using transgenic plants overproducing different kinds of truncated SLR1 proteins. The analyses revealed that the SLR1 protein can be divided into four parts: a GA signal perception domain located at the N terminus, a regulatory domain for its repression activity, a dimer formation domain essential for signal perception and repression activity, and a repression domain at the C terminus. We conclude that GA signal transduction is regulated by the appearance or disappearance of the nuclear SLR1 protein, which is controlled by the upstream GA signal.

Indexed as

Arabidopsis ProteinsGene Expression Regulation, PlantGibberellinsGreen Fluorescent ProteinsLuminescent ProteinsMutationNuclear Localization SignalsNuclear ProteinsOryzaPhenotypePlant Growth RegulatorsPlant ProteinsPlants, Genetically ModifiedPlant StructuresRecombinant Fusion ProteinsSequence DeletionArabidopsis ProteinsGAI protein, ArabidopsisGibberellinsGreen Fluorescent ProteinsLuminescent ProteinsNuclear Localization SignalsNuclear ProteinsPlant Growth RegulatorsPlant ProteinsRecombinant Fusion ProteinsSLR1 protein, BrassicaTranscription Factors

Identifiers

PMID11826299
PMCPMC150551
OpenAlexW2163628867

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.