Evidence map›Paper›PMID 11823439›Full record

ArticleThe EMBO journal2002

A cyclophilin functions in pre-mRNA splicing.

David S Horowitz, Edward J Lee, Stephen A Mabon, Tom Misteli

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 119 citations in OpenAlex.

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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

David S HorowitzDepartment of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, Bethesda, MD 20814, USA. dhorowitz@usuhs.mil
Edward J Lee
Stephen A Mabon
Tom Misteli
National Cancer Institute · USUniformed Services University of the Health Sciences · US

Funding

BIOCHEMISTRY OF PREMRNA SPLICING FACTORSR01GM057267 · NIGMS · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI HOROWITZ, DAVID S · 1999 to 2004
$737k
NIGMS NIH HHS GM57267NIGMS NIH HHS R01 GM057267
6 · The paper itself

Abstract

We report that the cyclophilin USA-CyP is part of distinct complexes with two spliceosomal proteins and is involved in both steps of pre-mRNA splicing. The splicing factors hPrp18 and hPrp4 have a short region of homology that defines a high affinity binding site for USA-CyP in each protein. USA-CyP forms separate, stable complexes with hPrp18 and hPrp4 in which the active site of the cyclophilin is exposed. The cyclophilin inhibitor cyclosporin A slows pre-mRNA splicing in vitro, and we show that its inhibition of the second step of splicing is caused by blocking the action of USA-CyP within its complex with hPrp18. Cyclosporin A also slows splicing in vivo, and we show that this slowing results specifically from inhibition of USA-CyP. Our results lead to a model in which USA-CyP is carried into the spliceosome in complexes with hPrp4 and hPrp18, and USA-CyP acts during splicing within these complexes. These results provide an example of the function of a cyclophilin in a complex process and provide insight into the mechanisms of action of cyclophilins.

Indexed as

RNA SplicingAmino Acid SequenceCyclophilinsHeLa CellsHumansMolecular Sequence DataNuclear ProteinsProtein Serine-Threonine KinasesRibonucleoprotein, U4-U6 Small NuclearRNA-Binding ProteinsRNA PrecursorsRNA Splicing FactorsCyclophilinsNuclear ProteinsProtein Serine-Threonine KinasesPRPF18 protein, humanPRPF4 protein, humanRibonucleoprotein, U4-U6 Small NuclearRNA-Binding ProteinsRNA PrecursorsRNA Splicing Factors

Identifiers

PMID11823439
PMCPMC125845
OpenAlexW2072428615

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.