Evidence map›Paper›PMID 11823428›Full record

ArticleThe EMBO journal2002

Identification of a ubiquitin-protein ligase subunit within the CCR4-NOT transcription repressor complex.

Thomas K Albert, Hiroyuki Hanzawa, Yvonne I A Legtenberg, Marjolein J de Ruwe, Fiona A J van den Heuvel, Martine A Collart, Rolf Boelens, H Th Marc Timmers

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 215 citations in OpenAlex.

  1. Article
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  8. The role of ubiquitin-conjugating enzyme in the process of spermatogenesis.Reproductive biology and endocrinology : RB&E · 2024
    Review
  9. Article
  10. Article
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  13. Article
  14. Conservation and Expansion of Transcriptional Factor Repertoire in thebioRxiv : the preprint server for biology · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Thomas K AlbertLaboratory for Physiological Chemistry, University Medical Center, 3508 AB Utrecht, The Netherlands.
Hiroyuki Hanzawa
Yvonne I A Legtenberg
Marjolein J de Ruwe
Fiona A J van den Heuvel
Martine A Collart
Rolf Boelens
H Th Marc Timmers
Utrecht University · NLUniversity of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The RING finger protein CNOT4 is a component of the CCR4-NOT complex. This complex is implicated in repression of RNA polymerase II transcription. Here we demonstrate that CNOT4 functions as a ubiquitin-protein ligase (E3). We show that the unique C4C4 RING domain of CNOT4 interacts with a subset of ubiquitin-conjugating enzymes (E2s). Using NMR spectroscopy, we detail the interaction of CNOT4 with UbcH5B and characterize RING residues that are critical for this interaction. CNOT4 acts as a potent E3 ligase in vitro. Mutations that destabilize the E2-E3 interface abolish this activity. Based on these results, we present a model of how E3 ligase function within the CCR4-NOT complex relates to transcriptional regulation.

Indexed as

RibonucleasesSaccharomyces cerevisiae ProteinsAmino Acid SequenceDNA-Binding ProteinsFungal ProteinsLigasesModels, MolecularMolecular Sequence DataRepressor ProteinsSaccharomyces cerevisiaeTranscription FactorsTranscription, GeneticUbiquitin-Conjugating EnzymesUbiquitin-Protein LigasesCCR4 protein, S cerevisiaeDNA-Binding ProteinsFungal ProteinsLigasesRepressor ProteinsRibonucleasesSaccharomyces cerevisiae ProteinsTranscription FactorsUbiquitin-Conjugating EnzymesUbiquitin-Protein Ligases

Identifiers

PMID11823428
PMCPMC125831
OpenAlexW2042170986

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.