ArticleNucleic acids research2001
Sequence organization of barley centromeres.
Article in Nucleic acids research, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.
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Who cites it
71 citing papers in PubMed, 170 citations in OpenAlex.
- Near-complete assembly of wild emmer wheat unveils centromere reorganization during polyploid evolution.Nature genetics · 2026Article
- A chromosome-scale genome assembly of Hordeum erectifolium: genomic, transcriptomic and anatomical adaptations to drought in a wild barley relative.The New phytologist · 2026Article
- Hexaploid Wheat × Barley (Triticum aestivum × Hordeum vulgare) Intergeneric Hybrids: Production and Analysis.Methods in molecular biology (Clifton, N.J.) · 2026Article
- Reference-based chromosome-scale assembly of Japanese barley (Hordeum vulgare ssp. vulgare) cultivar Hayakiso 2.DNA research : an international journal for rapid publication of reports on genes and genomes · 2025Article
- Post-polyploidization centromere evolution in cotton.Nature genetics · 2025Article
- Highly divergent satellitomes of two barley species of agronomic importance, Hordeum chilense and H. vulgare.Plant molecular biology · 2024Article
- Unveiling the distinctive traits of functional rye centromeres: minisatellites, retrotransposons, and R-loop formation.Science China. Life sciences · 2024Article
- Non-B-form DNA is associated with centromere stability in newly-formed polyploid wheat.Science China. Life sciences · 2024Article
- Plasticity of parental CENH3 incorporation into the centromeres in wheat × barley F1 hybrids.Frontiers in plant science · 2024Article
- Image analysis workflows to reveal the spatial organization of cell nuclei and chromosomes.Nucleus (Austin, Tex.) · 2022Article
- A Multigraph-Based Representation of Hi-C Data.Genes · 2022Article
- Chromosome-scale assembly and annotation of the perennial ryegrass genome.BMC genomics · 2022Article
- Prospects of telomere-to-telomere assembly in barley: Analysis of sequence gaps in the MorexV3 reference genome.Plant biotechnology journal · 2022Article
- Draft Sequencing Crested Wheatgrass Chromosomes Identified Evolutionary Structural Changes and Genes and Facilitated the Development of SSR Markers.International journal of molecular sciences · 2022Article
- Article
- Subtelomeric assembly of a multi-gene pathway for antimicrobial defense compounds in cereals.Nature communications · 2021Article
- Comparative analyses of DNA repeats and identification of a novel Fesreba centromeric element in fescues and ryegrasses.BMC plant biology · 2020Article
- Centromere Satellite Repeats Have Undergone Rapid Changes in Polyploid Wheat Subgenomes.The Plant cell · 2019Article
- Article
- DDM1 Represses Noncoding RNA Expression and RNA-Directed DNA Methylation in Heterochromatin.Plant physiology · 2018Article
11 more citing papers are in PubMed but not listed here.
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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
By sequencing, fingerprinting and in situ hybridization of a centromere-specific large insert clone (BAC 7), the sequence organization of centromeric DNA of barley could be elucidated. Within 23 kb, three copies of the Ty3/gypsy-like retroelement cereba were present. Two elements of approximately 7 kb, arranged in tandem, include long terminal repeats (LTRs) (approximately 1 kb) similar to the rice centromeric retrotransposon RIRE 7 and to the cereal centromeric sequence family, the primer binding site, the complete polygene flanked by untranslated regions, as well as a polypurine tract 5' of the downstream LTR. The high density (approximately 200 elements/centromere) and completeness of cereba elements and the absence of internally deleted elements and solo LTRs from the BAC 7 insert represent unique features of the barley centromeres as compared to those of other cereals. Obviously, the conserved cereba elements together with barley-specific G+C-rich satellite sequences constitute the major components of centromeric DNA in this species.
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