Evidence map›Paper›PMID 11809875›Full record

ArticleNucleic acids research2002

Phosphorylation of Rph1, a damage-responsive repressor of PHR1 in Saccharomyces cerevisiae, is dependent upon Rad53 kinase.

Eun Mi Kim, Yeun Kyu Jang, Sang Dai Park

Abstract read
In one paragraph

Article in Nucleic acids research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Checkpoint Responses to DNA Double-Strand Breaks.Annual review of biochemistry · 2020
    Review
  5. Article
  6. A pathway of targeted autophagy is induced by DNA damage in budding yeast.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  7. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Eun Mi KimSchool of Biological Sciences, Seoul National University, Seoul 151-742, Republic of Korea.
Yeun Kyu Jang
Sang Dai Park
Seoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rph1, a Cys2-His2 zinc finger protein, binds to an upstream repressing sequence of the photolyase gene PHR1, and represses its transcription in response to DNA damage in Saccharomyces cerevisiae. In this report, we have demonstrated that the phosphorylation of Rph1 protein was increased in response to DNA damage. The DNA damage-induced phosphorylation of Rph1 was missing in most damage checkpoint mutants including rad9, rad17, mec1 and rad53. These results indicate that Rph1 phosphorylation is under the control of the Mec1-Rad53 damage checkpoint pathway. Rph1 phosphorylation required the kinase activity of Rad53 since it was significantly decreased in rad53 checkpoint mutant. Furthermore, loss of other kinases including Dun1, Tel1 and Chk1, which function downstream of Mec1, did not affect the Rph1 phosphorylation. This contrasts with the derepression of Crt1-regulated genes, which requires both Rad53 and Dun1 protein kinases. These results imply that post-translational modification of Rph1 repressor is regulated by a potentially novel damage checkpoint pathway that is distinct from the RAD53-DUN1-CRT1 cascade implicated in the DNA damage-dependent transcription of ribonucleotide reductase genes.

Indexed as

Cell Cycle ProteinsDNA DamageFungal ProteinsMembrane GlycoproteinsSaccharomyces cerevisiaeApoenzymesBlotting, WesternCell CycleCheckpoint Kinase 2Deoxyribodipyrimidine Photo-LyaseGenes, FungalHistone DemethylasesMutationPhosphorylationPhosphoserinePhosphothreonineApoenzymesCell Cycle ProteinsCheckpoint Kinase 2Deoxyribodipyrimidine Photo-LyaseFungal ProteinsHistone DemethylasesMembrane GlycoproteinsPhosphoserinePhosphothreoninePHR1 protein, Candida albicansProtein Serine-Threonine KinasesRAD53 protein, S cerevisiaeRecombinant Fusion ProteinsRepressor ProteinsRPH1 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID11809875
PMCPMC100300
OpenAlexW2164389241

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.