Evidence map›Paper›PMID 11796646›Full record

ArticleInfection and immunity2002

Urease of enterohemorrhagic Escherichia coli: evidence for regulation by fur and a trans-acting factor.

Susan R Heimer, Rod A Welch, Nicole T Perna, György Pósfai, Peter S Evans, James B Kaper, Fred R Blattner, Harry L T Mobley

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 46 citations in OpenAlex.

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  14. Pathogenic Escherichia coli.Nature reviews. Microbiology · 2004
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Susan R HeimerDepartment of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.
Rod A Welch
Nicole T Perna
György Pósfai
Peter S Evans
James B Kaper
Fred R Blattner
Harry L T Mobley
University of Maryland, Baltimore · USUniversity of Wisconsin–Madison · USHUN-REN Szegedi Biológiai Kutatóközpont · HU

Funding

D-serine/DsdCXA Control of E. coli UropathogenesisR01DK063250 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI WELCH, RODNEY A. · 2003 to 2013
$3.3M
BACTERIAL UREASE IN UTIR01AI023328 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI MOBLEY, HARRY L. · 1991 to 2000
$265k
BACTERIAL UREASE IN THE CATHETERIZED URINARY TRACTR23AI023328 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI MOBLEY, HARRY L. · 1986 to 1986
–
BACTERIAL UREASE IN THE CATHETERIZED URINARY TRACTR29AI023328 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI MOBLEY, HARRY L. · 1987 to 1990
–
NIAID NIH HHS AI23328NIDDK NIH HHS R01 DK063250
6 · The paper itself

Abstract

Recent genomic analyses of Escherichia coli O157:H7 strain EDL933 revealed two loci encoding urease gene homologues (ureDABCEFG), which are absent in nonpathogenic E. coli strain K-12. This report demonstrates that the cloned EDL933 ure gene cluster is capable of synthesizing urease in an E. coli DH5alpha background. However, when the gene fragment is transformed back into the native EDL933 background, the enzymatic activity of the cloned determinants is undetectable. We speculate that an unidentified trans-acting factor in enterohemorrhagic E. coli (EHEC) is responsible for this regulation of ure expression. In addition, Fur-like recognition sites are present in three independent O157:H7 isolates upstream of ureD and ureA. Enzymatic assays confirmed a difference in urease expression of cloned EHEC ure clusters in E. coli MC3100Deltafur. Likewise, interruption of fur in O157:H7 isolate IN1 significantly diminished urease activity. We propose that, similar to the function of Fur in regulating the acid response of Salmonella enterica serovar Typhimurium, it modulates urease expression in EHEC, perhaps contributing to the acid tolerance of the organism.

Indexed as

Bacterial ProteinsBase SequenceDNA, BacterialEscherichia coli O157Gene ExpressionGenes, BacterialMolecular Sequence DataMultigene FamilyRepressor ProteinsSequence Analysis, DNATrans-ActivatorsUreaseBacterial ProteinsDNA, Bacterialferric uptake regulating proteins, bacterialRepressor ProteinsTrans-ActivatorsUrease

Identifiers

PMID11796646
PMCPMC127683
OpenAlexW2158430061

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.