Evidence map›Paper›PMID 11790749›Full record

ArticleJournal of bacteriology2002

Galactose and lactose genes from the galactose-positive bacterium Streptococcus salivarius and the phylogenetically related galactose-negative bacterium Streptococcus thermophilus: organization, sequence, transcription, and activity of the gal gene products.

Katy Vaillancourt, Sylvain Moineau, Michel Frenette, Christian Lessard, Christian Vadeboncoeur

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
11.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Milk fermentation by monocultures or co-cultures ofFrontiers in bioengineering and biotechnology · 2022
    Article
  5. Article
  6. Article
  7. β-Galactosidase fromInternational journal of molecular sciences · 2019
    Article
  8. Article
  9. Quantitative Proteomics of Strong and Weak Biofilm Formers ofMolecular & cellular proteomics : MCP · 2018
    Article
  10. Comparative Transcriptomic Analysis ofFrontiers in microbiology · 2018
    Article
  11. Article
  12. Article
  13. Article
  14. Transcriptional and functional analysis of galactooligosaccharide uptake by lacS in Lactobacillus acidophilus.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Global analysis of carbohydrate utilization by Lactobacillus acidophilus using cDNA microarrays.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Katy VaillancourtGroupe de Recherche en Ecologie Buccale, Département de Biochimie et de Microbiologie, Faculté des Sciences et de Génie and Faculté de Médecine Dentaire, Université Laval, Québec, Québec, Canada G1K 7P4.
Sylvain Moineau
Michel Frenette
Christian Lessard
Christian Vadeboncoeur
Université Laval · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Streptococcus salivarius is a lactose- and galactose-positive bacterium that is phylogenetically closely related to Streptococcus thermophilus, a bacterium that metabolizes lactose but not galactose. In this paper, we report a comparative characterization of the S. salivarius and S. thermophilus gal-lac gene clusters. The clusters have the same organization with the order galR (codes for a transcriptional regulator and is transcribed in the opposite direction), galK (galactokinase), galT (galactose-1-P uridylyltransferase), galE (UDP-glucose 4-epimerase), galM (galactose mutarotase), lacS (lactose transporter), and lacZ (beta-galactosidase). An analysis of the nucleotide sequence as well as Northern blotting and primer extension experiments revealed the presence of four promoters located upstream from galR, the gal operon, galM, and the lac operon of S. salivarius. Putative promoters with virtually identical nucleotide sequences were found at the same positions in the S. thermophilus gal-lac gene cluster. An additional putative internal promoter at the 3' end of galT was found in S. thermophilus but not in S. salivarius. The results clearly indicated that the gal-lac gene cluster was efficiently transcribed in both species. The Shine-Dalgarno sequences of galT and galE were identical in both species, whereas the ribosome binding site of S. thermophilus galK differed from that of S. salivarius by two nucleotides, suggesting that the S. thermophilus galK gene might be poorly translated. This was confirmed by measurements of enzyme activities.

Indexed as

Escherichia coli ProteinsGenes, BacterialMonosaccharide Transport ProteinsSymportersBase SequenceGalactokinaseGalactoseLac OperonLactoseMembrane Transport ProteinsMolecular Sequence DataMultigene FamilyRepressor ProteinsRNA, BacterialRNA, MessengerSpecies SpecificityEscherichia coli ProteinsGalactokinaseGalactoseGalactose repressor proteinsLactoselactose permeaseLacY protein, E coliMembrane Transport ProteinsMonosaccharide Transport ProteinsRepressor ProteinsRNA, BacterialRNA, MessengerSymportersUDPglucose 4-EpimeraseUTP-Hexose-1-Phosphate Uridylyltransferase

Identifiers

PMID11790749
PMCPMC139519
OpenAlexW2167742785

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.