Evidence map›Paper›PMID 11782446›Full record

ArticleGenes & development2002

The KH-type RNA-binding protein PSI is required for Drosophila viability, male fertility, and cellular mRNA processing.

Emmanuel Labourier, Marco Blanchette, Jennie W Feiger, Melissa D Adams, Donald C Rio

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. eLife · 2019
    Article
  3. P-element Somatic Inhibitor Protein Binding a Target Sequence inInternational journal of molecular sciences · 2019
    Article
  4. Article
  5. JUM is a computational method for comprehensive annotation-free analysis of alternative pre-mRNA splicing patterns.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  6. Article
  7. The PSI-U1 snRNP interaction regulates male mating behavior in Drosophila.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Emmanuel LabourierDepartment of Molecular and Cell Biology, University of California, Berkeley, California 94720, USA.
Marco Blanchette
Jennie W Feiger
Melissa D Adams
Donald C Rio
University of California, Berkeley · US

Funding

BIOCHEMISTRY OF REGULATED PRE-MRNA SPLICING/DROSOPHILAR01GM061987 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI RIO, DONALD C · 2000 to 2010
$3.0M
NIGMS NIH HHS R01 GM061987NIGMS NIH HHS R01GM61987-11
6 · The paper itself

Abstract

Direct interactions between RNA-binding proteins and snRNP particles modulate eukaryotic pre-mRNA processing patterns to control gene expression. Here, we report that the conserved U1 snRNP-interacting RNA-binding protein PSI is essential for Drosophila viability. A null PSI mutation is recessive lethal at the first-instar larval stage, and lethality is fully rescued by transgenes expressing the PSI protein. A mutant transgene that lacks the PSI-U1 snRNP-interaction domain restores viability but shows courtship behavior abnormalities and meiosis defects during spermatogenesis, resulting in a complete male sterility phenotype. Using cDNA microarrays, we have identified specific target mRNAs with altered expression profiles in these mutant males. A subset of these transcripts is also found associated with PSI in endogenous immunopurified ribonucleoprotein complexes. One specific target, the hrp40/squid transcript, shows an altered pre-mRNA splicing pattern in PSI mutant testes. We conclude that a functional association between the PSI protein and the spliceosomal U1 snRNP particle is required for normal Drosophila development and for the processing of specific PSI-interacting cellular transcripts. These results also validate the use of cDNA microarrays to characterize in vivo RNA-processing defects and alternative pre-mRNA splicing patterns.

Indexed as

Drosophila ProteinsNuclear ProteinsRNA, MessengerRNA PrecursorsAnimalsDrosophila melanogasterFertilityGene Expression RegulationMaleRibonucleoproteins, Small NuclearRNA-Binding ProteinsRNA Processing, Post-TranscriptionalRNA SplicingSpermatogenesisDrosophila ProteinsNuclear ProteinsPSI protein, DrosophilaRibonucleoproteins, Small NuclearRNA-Binding ProteinsRNA, MessengerRNA Precursors

Identifiers

PMID11782446
PMCPMC155316
OpenAlexW2101943001

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.