ArticleGenome research2002
Analysis of the 5S RNA pool in Arabidopsis thaliana: RNAs are heterogeneous and only two of the genomic 5S loci produce mature 5S RNA.
Article in Genome research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
23 citing papers in PubMed, 62 citations in OpenAlex.
- Genome sequence assembly of the 5S rDNA loci informs haplotype specificity and evolution in the greater duckweed Spirodela polyrhiza.Communications biology · 2026Article
- Contrasting patterns of 5S rDNA repeats in European and Asian ecotypes of greater duckweed,Frontiers in plant science · 2024Article
- Polymer modelling unveils the roles of heterochromatin and nucleolar organizing regions in shaping 3D genome organization in Arabidopsis thaliana.Nucleic acids research · 2021Article
- The rDNA Loci-Intersections of Replication, Transcription, and Repair Pathways.International journal of molecular sciences · 2021Review
- It Is Just a Matter of Time: Balancing Homologous Recombination and Non-homologous End Joining at the rDNA Locus During Meiosis.Frontiers in plant science · 2021Review
- The C- and G-value paradox with polyploidy, repeatomes, introns, phenomes and cell economy.Genes & genomics · 2020Review
- The epigenetic regulation of centromeres and telomeres in plants and animals.Comparative cytogenetics · 2020Review
- Promoter-specific dynamics of TATA-binding protein association with the human genome.Genome research · 2019Article
- Genetic and epigenetic variation in 5S ribosomal RNA genes reveals genome dynamics in Arabidopsis thaliana.Nucleic acids research · 2018Article
- Evolution of blue-flowered species of genus Linum based on high-throughput sequencing of ribosomal RNA genes.BMC evolutionary biology · 2017Article
- Epistatic and allelic interactions control expression of ribosomal RNA gene clusters in Arabidopsis thaliana.Genome biology · 2017Article
- Arabidopsis Pol II-Dependent in Vitro Transcription System Reveals Role of Chromatin for Light-Inducible rbcS Gene Transcription.Plant physiology · 2016Article
- Arabidopsis MAS2, an Essential Gene That Encodes a Homolog of Animal NF-κ B Activating Protein, Is Involved in 45S Ribosomal DNA Silencing.The Plant cell · 2015Article
- Structure and Function of Centromeric and Pericentromeric Heterochromatin in Arabidopsis thaliana.Frontiers in plant science · 2015Review
- The cytological and molecular role of domains rearranged methyltransferase3 in RNA-dependent DNA methylation of Arabidopsis thaliana.BMC research notes · 2014Article
- A Pol V-mediated silencing, independent of RNA-directed DNA methylation, applies to 5S rDNA.PLoS genetics · 2009Article
- Heterochromatic siRNAs and DDM1 independently silence aberrant 5S rDNA transcripts in Arabidopsis.PloS one · 2009Article
- Low abundant spacer 5S rRNA transcripts are frequently polyadenylated in Nicotiana.Molecular genetics and genomics : MGG · 2007Article
- Polymorphic chromosomal specificity of centromere satellite families in Arabidopsis halleri ssp. gemmifera.Genetica · 2006Article
- Distinct regulation of histone H3 methylation at lysines 27 and 9 by CpG methylation in Arabidopsis.The EMBO journal · 2005Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
8 authors at 1 institution in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
One major 5S RNA, 120 bases long, was revealed by an analysis of mature 5S RNA from tissues, developmental stages, and polysomes in Arabidopsis thaliana. Minor 5S RNA were also found, varying from the major one by one or two base substitutions; 5S rDNA units from each 5S array of the Arabidopsis genome were isolated by PCR using CIC yeast artificial chromosomes (YACs) mapped on the different loci. By using a comparison of the 5S DNA and RNA sequences, we could show that both major and minor 5S transcripts come from only two of the genomic 5S loci: chromosome 4 and chromosome 5 major block. Other 5S loci are either not transcribed or produce rapidly degraded 5S transcripts. Analysis of the 5'- and 3'-DNA flanking sequence has permitted the definition of specific signatures for each 5S rDNA array.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.