Evidence map›Paper›PMID 11779801›Full record

ArticleGenetics2001

In Caenorhabditis elegans, the RNA-binding domains of the cytoplasmic polyadenylation element binding protein FOG-1 are needed to regulate germ cell fates.

S W Jin, N Arno, A Cohen, A Shah, Q Xu, N Chen, R E Ellis

Abstract read
In one paragraph

Article in Genetics, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Sex Determination in Nematode Germ Cells.Sexual development : genetics, molecular biology, evolution, endocrinology, embryology, and pathology of sex determination and differentiation · 2022
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. The regulation of spermatogenesis and sperm function in nematodes.Seminars in cell & developmental biology · 2014
    Review
  9. Review
  10. Article
  11. Developmental expression of FOG-1/CPEB protein and its control in the Caenorhabditis elegans hermaphrodite germ line.Developmental dynamics : an official publication of the American Association of Anatomists · 2007
    Article
  12. Germ-line induction of the Caenorhabditis elegans vulva.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  13. Article
  14. Specificity factors in cytoplasmic polyadenylation.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

S W JinDepartment of Biology, University of Michigan, Ann Arbor, Michigan 48109, USA.
N Arno
A Cohen
A Shah
Q Xu
N Chen
R E Ellis
University of Michigan–Ann Arbor · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

FOG-1 controls germ cell fates in the nematode Caenorhabditis elegans. Sequence analyses revealed that FOG-1 is a cytoplasmic polyadenylation element binding (CPEB) protein; similar proteins from other species have been shown to bind messenger RNAs and regulate their translation. Our analyses of fog-1 mutations indicate that each of the three RNA-binding domains of FOG-1 is essential for activity. In addition, biochemical tests show that FOG-1 is capable of binding RNA sequences in the 3'-untranslated region of its own message. Finally, genetic assays reveal that fog-1 functions zygotically, that the small fog-1 transcript has no detectable function, and that missense mutations in fog-1 cause a dominant negative phenotype. This last observation suggests that FOG-1 acts in a complex, or as a multimer, to regulate translation. On the basis of these data, we propose that FOG-1 binds RNA to regulate germ cell fates and that it does so by controlling the translation of its targets. One of these targets might be the fog-1 transcript itself.

Indexed as

Polyadenylation3' Untranslated RegionsAllelesAmino Acid SequenceAnimalsBase SequenceBlotting, NorthernBlotting, WesternCaenorhabditis elegansCaenorhabditis elegans ProteinsCarrier ProteinsChromosome MappingCloning, MolecularCrosses, GeneticCytoplasmDNA, Complementary3' Untranslated RegionsCaenorhabditis elegans ProteinsCarrier ProteinsDNA, Complementaryfog-1 protein, C elegansNuclear ProteinsRNARNA, Messenger

Identifiers

PMID11779801
PMCPMC1461887
OpenAlexW1925938683

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.