Evidence map›Paper›PMID 11763995›Full record

ArticleGene expression2001

Adenovirus-mediated increase of HNF-3 levels stimulates expression of transthyretin and sonic hedgehog, which is associated with F9 cell differentiation toward the visceral endoderm lineage.

Y Tan, R H Costa, I Kovesdi, R R Reichel

Open access · hybridAbstract read
In one paragraph

Article in Gene expression, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Y TanUniversity of Illinois at Chicago, College of Medicine, Department of Molecular Genetics, 60607-7170, USA. ytan@uic.edu
R H Costa
I Kovesdi
R R Reichel
University of Illinois Chicago · US

Funding

REGULATION OF TRANSTHYRETIN IN THE LIVERR01GM043241 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI RAYCHAUDHURI, PRADIP · 1990 to 2006
$2.2M
NIGMS NIH HHS R01 GM043241NIGMS NIH HHS R01 GM43241-11
6 · The paper itself

Abstract

Retinoic acid-induced differentiation of mouse F9 embryonal carcinoma cells toward the visceral endoderm lineage is accompanied by increased expression of the Forkhead Box (Fox) transcription factors hepatocyte nuclear factor 3a (HNF-3alpha) and HNF-3beta, suggesting that they play a crucial role in visceral endoderm development. Retinoic acid stimulation results in a cascade of HNF-3 induction in which HNF-3alpha is a primary target for retinoic acid action and its increase is required for subsequent induction of HNF-3beta expression. Increased expression of HNF-3beta precedes activation of its known target genes, including transthyretin (TTR), Sonic hedgehog (Shh), HNF-1alpha, HNF-1beta, and HNF-4alpha. In order to examine whether increased HNF-3 expression is sufficient to induce expression of its downstream target genes without retinoic acid stimulation, we have used adenovirus-based expression vectors to increase HNF-3 protein levels in F9 cells. We demonstrate that adenovirus-mediated increase of HNF-3alpha levels in F9 cells is sufficient to induce activation of endogenous HNF-3beta levels followed by increased TTR and Shh expression. Furthermore, we show that elevated HNF-3beta levels stimulate expression of endogenous TTR and Shh without retinoic acid stimulation. Moreover, ectopic HNF-3 levels in undifferentiated F9 cells are insufficient to induce HNF-3alpha, HNF-1alpha, HNF-1beta, and HNF-4alpha expression, suggesting that their transcriptional activation required other regulatory proteins induced by the retinoic acid differentiation program. Finally, our studies demonstrate the utility of cell infections with adenovirus expressing distinct transcription factors to identify endogenous target genes, which are assembled with the appropriate nucleosome structure.

Indexed as

Transcription FactorsAdenoviridaeAnimalsCell DifferentiationCell LineCell LineageChloramphenicol O-AcetyltransferaseDNA-Binding ProteinsEndodermGene Expression RegulationGenetic VectorsHedgehog ProteinsHepatocyte Nuclear Factor 3-alphaHepatocyte Nuclear Factor 3-betaHumansMiceChloramphenicol O-AcetyltransferaseDNA-Binding ProteinsFOXA1 protein, humanFoxa1 protein, mouseFOXA2 protein, humanFoxa2 protein, mouseHedgehog ProteinsHepatocyte Nuclear Factor 3-alphaHepatocyte Nuclear Factor 3-betaNuclear ProteinsPrealbuminRNA, MessengerSHH protein, humanTrans-ActivatorsTranscription Factors

Identifiers

PMID11763995
PMCPMC5964945
OpenAlexW2418066979

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.