Evidence map›Paper›PMID 11757581›Full record

ArticleJournal of inherited metabolic disease2001

Novel exon 11 skipping mutation in a patient with glycogen storage disease type IIId.

H Sugie, T Fukuda, M Ito, Y Sugie, T Kojoh, I Nonaka

Abstract readCase Reports
PubMed Publisher
In one paragraph

Article in Journal of inherited metabolic disease, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact, top 100% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

H SugieDepartment of Pediatric Neurology, Neuromuscular Laboratory, Hamamatsu City Medical Center for Developmental Medicine, Hamakita City, Shizuoka, Japan. hattatsu@city.hamamatsu.shizuoka.jp
T Fukuda
M Ito
Y Sugie
T Kojoh
I Nonaka
Hamamatsu Medical Center · JPNational Center of Neurology and Psychiatry · JPHamamatsu University School of Medicine · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report the molecular genetic abnormalities of a patient with GSD IIId presenting with progressive myopathy and cardiopathy leading to a fatal outcome. We identified two independent deletions including a 4 bp deletion (117-1120) and a 98 bp deletion (1135-1232) in cDNA. Sequencing of the genomic DNA of the corresponding region revealed a 4 bp deletion in exon 10; however, the other 98 bp deletion corresponding to exon 11, which was deleted in cDNA, was present in genomic DNA. We therefore concluded that skipping of exon 11 occurred in the cDNA of the patient. Intron/exon boundary analysis of the skipped exon 11 revealed no mutation in the consensus splice-site sequence. If normal splicing had occurred, a stop codon would have appeared within exon II due to frameshift mutation. The mechanism of exon skipping observed in our patient is as yet unknown, and it is still not clear whether intraexonal mutation of the preceding exon can influence splice-site selection. It is possible that a unique exon skipping occurred, preventing the appearance of a stop codon in our patient.

Indexed as

AdultCardiomyopathiesDisease ProgressionDNA, ComplementaryDNA PrimersElectrophoresis, Agar GelExonsFatal OutcomeFemaleGlycogen Debranching Enzyme SystemGlycogen Storage Disease Type IIIHumansLiverMuscle, SkeletalMuscular DiseasesMutationDNA, ComplementaryDNA PrimersGlycogen Debranching Enzyme SystemRNA, Messenger

Identifiers

PMID11757581
OpenAlexW38809747

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.