Evidence map›Paper›PMID 11756541›Full record

ArticleMolecular and cellular biology2002

Replication initiation patterns in the beta-globin loci of totipotent and differentiated murine cells: evidence for multiple initiation regions.

Mirit I Aladjem, Luo Wei Rodewald, Chii Mai Lin, Sarah Bowman, Daniel M Cimbora, Linnea L Brody, Elliot M Epner, Mark Groudine, Geoffrey M Wahl

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. DNA replication timing.Cold Spring Harbor perspectives in biology · 2013
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Domain-wide regulation of DNA replication timing during mammalian development.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2010
    Article
  16. Cyclin A-Cdk1 regulates the origin firing program in mammalian cells.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Mirit I AladjemLaboratory of Molecular Pharmacology, National Cancer Institute, Bethesda, Maryland 20892-4255, USA. maladjem@helix.nih.gov
Luo Wei Rodewald
Chii Mai Lin
Sarah Bowman
Daniel M Cimbora
Linnea L Brody
Elliot M Epner
Mark Groudine
Geoffrey M Wahl
National Cancer Institute · USSalk Institute for Biological Studies · USFred Hutch Cancer Center · USArizona Oncology · US

Funding

FUNCTION OF HUMAN &MOUSE B GLOBIN LOCUS CONTROL REGIONSR37DK044746 · NIDDK · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GROUDINE, MARK T · 1997 to 2016
$12.3M
MOLECULAR GENETIC ANALYSIS OF MAMMALIAN DNA REPLICATIONR01CA048405 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI WAHL, GEOFFREY MYLES · 1995 to 2004
$2.5M
FUNCTION OF THE HUMAN B-GLOBIN LOCUS CONTROL REGION-LCRR01DK044746 · NIDDK · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GROUDINE, MARK T · 1992 to 1996
–
DNA REPLICATION, CELL CYCLE CONTROL AND GENOME FLUIDITYR01GM051104 · NIGMS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI WAHL, GEOFFREY MYLES · 1993 to 1996
–
DETECTION AND CURING OF AMPLIFIED GENES IN HUMAN CANCERU01CA048405 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI WAHL, GEOFFREY MYLES · 1988 to 1994
–
NCI NIH HHS CA48405NCI NIH HHS R01 CA048405NIDDK NIH HHS DK44746NIDDK NIH HHS R37 DK044746NIGMS NIH HHS GM51104
6 · The paper itself

Abstract

The replication initiation pattern of the murine beta-globin locus was analyzed in totipotent embryonic stem cells and in differentiated cell lines. Initiation events in the murine beta-globin locus were detected in a region extending from the embryonic Ey gene to the adult betaminor gene, unlike the restricted initiation observed in the human locus. Totipotent and differentiated cells exhibited similar initiation patterns. Deletion of the region between the adult globin genes did not prevent initiation in the remainder of the locus, suggesting that the potential to initiate DNA replication was not contained exclusively within the primary sequence of the deleted region. In addition, a deletion encompassing the six identified 5' hypersensitive sites in the mouse locus control region had no effect on initiation from within the locus. As this deletion also did not affect the chromatin structure of the locus, we propose that the sequences determining both chromatin structure and replication initiation lie outside the hypersensitive sites removed by the deletion.

Indexed as

DNA ReplicationAnimalsBase SequenceBinding SitesCell DifferentiationCell LineDNAGene Expression RegulationGlobinsHumansMiceSequence DeletionS PhaseStem CellsDNAGlobins

Identifiers

PMID11756541
PMCPMC139749
OpenAlexW2054765269

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.