Evidence map›Paper›PMID 11752348›Full record

ArticleNucleic acids research2002

GeneNet: a database on structure and functional organisation of gene networks.

E A Ananko, N L Podkolodny, I L Stepanenko, E V Ignatieva, O A Podkolodnaya, N A Kolchanov

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
  3. Co-expression networks uncover regulation of splicing and transcription markers of disease.Proceedings of the ... annual International Conference on BioInformatics and Computational Biology · 2020
    Article
  4. Article
  5. Article
  6. Article
  7. GeneNet in 2005.Nucleic acids research · 2005
    Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

E A AnankoInstitute of Cytology and Genetics (Siberian Branch of the Russian Academy of Sciences), 10 Lavrentiev Avenue, Novosibirsk, 630090, Russia. eananko@bionet.nsc.ru
N L Podkolodny
I L Stepanenko
E V Ignatieva
O A Podkolodnaya
N A Kolchanov
Institute of Cytology and Genetics · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The GeneNet database is designed for accumulation of information on gene networks. Original technology applied in GeneNet enables description of not only a gene network structure and functional relationships between components, but also metabolic and signal transduction pathways. Specialised software, GeneNet Viewer, automatically displays the graphical diagram of gene networks described in the database. Current release 3.0 of GeneNet database contains descriptions of 25 gene networks, 945 proteins, 567 genes, 151 other substances and 1364 relationships between components of gene networks. Information distributed between 14 interlinked tables was obtained by annotating 968 scientific publications. The SRS-version of GeneNet database is freely available (http://wwwmgs.bionet.nsc.ru/mgs/systems/genenet/).

Indexed as

Databases, GeneticAnimalsComputer GraphicsForecastingGenesHumansInformation Storage and RetrievalInternetMetabolismProteinsRNASignal TransductionUser-Computer InterfaceProteinsRNA

Identifiers

PMID11752348
PMCPMC99151
OpenAlexW2148151865

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.