Evidence map›Paper›PMID 11752344›Full record

ArticleNucleic acids research2002

FUGOID: functional genomics of organellar introns database.

Fei Li, David L Herrin

Abstract read
In one paragraph

Article in Nucleic acids research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. ChloroMitoSSRDB: open source repository of perfect and imperfect repeats in organelle genomes for evolutionary genomics.DNA research : an international journal for rapid publication of reports on genes and genomes · 2013
    Article
  3. Database for bacterial group II introns.Nucleic acids research · 2012
    Article
  4. Chloroplast RNA processing and stability.Photosynthesis research · 2004
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Fei LiSection of Molecular Cell and Developmental Biology and Institute of Cellular and Molecular Biology, The University of Texas at Austin, 78713, USA.
David L Herrin

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

FUGOID is a web-based, taxonomically broad organelle intron database that collects and integrates various functional and structural data on organellar (mitochondrial and chloroplast) introns. The main information provided by FUGOID includes intron sequence, subclass, resident ORF, self-splicing capability, host gene, protein factor(s) involved in splicing, mobility, insertion site, twintron, seminal references and taxonomic position of host organism. It is implemented in a relational database management system, allowing sophisticated, user-friendly searching, data entry and revision. Users can access the database by any common web browser using a variety of operating systems. The main page of the database is available at http://wnt.cc.utexas.edu/~ifmr530/introndata/main.htm.

Indexed as

Databases, Nucleic AcidGenomicsAnimalsDatabase Management SystemsForecastingInformation Storage and RetrievalInternetIntronsRNARNA, CatalyticRNA, ChloroplastRNA, MitochondrialRNA SplicingRNARNA, CatalyticRNA, ChloroplastRNA, Mitochondrial

Identifiers

PMID11752344
PMCPMC99166

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.