ArticleNucleic acids research2002
The tmRNA Website: invasion by an intron.
Article in Nucleic acids research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed.
- Group I introns in tRNA genes of Patescibacteria.mSystems · 2026Article
- Expansion of the tmRNA sequence database and new tools for search and visualization.NAR genomics and bioinformatics · 2025Article
- Solution structure and backbone dynamics for S1 domain of ribosomal protein S1 from Mycobacterium tuberculosis.European biophysics journal : EBJ · 2019Article
- RAG-3D: a search tool for RNA 3D substructures.Nucleic acids research · 2015Article
- Riboregulation in plant-associated α-proteobacteria.RNA biology · 2014Review
- Network Theory Tools for RNA Modeling.WSEAS transactions on mathematics · 2013Article
- Genome of alkaliphilic Bacillus pseudofirmus OF4 reveals adaptations that support the ability to grow in an external pH range from 7.5 to 11.4.Environmental microbiology · 2011Article
- Detection of tmRNA molecules on microarrays at low temperatures using helper oligonucleotides.BMC biotechnology · 2010Article
- Preparation of group I introns for biochemical studies and crystallization assays by native affinity purification.PloS one · 2009Article
- Article
- Cyanobacterial ribosomal RNA genes with multiple, endonuclease-encoding group I introns.BMC evolutionary biology · 2007Article
- Comparative 3-D modeling of tmRNA.BMC molecular biology · 2005Article
- Loss of the mRNA-like region in mitochondrial tmRNAs of jakobids.RNA (New York, N.Y.) · 2004Article
- ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences.Nucleic acids research · 2004Article
- tmRNA in Caulobacter crescentus is cell cycle regulated by temporally controlled transcription and RNA degradation.Journal of bacteriology · 2003Article
- TmRNA is required for correct timing of DNA replication in Caulobacter crescentus.Journal of bacteriology · 2003Article
- tmRDB (tmRNA database).Nucleic acids research · 2003Article
- Rfam: an RNA family database.Nucleic acids research · 2003Article
- RECODE 2003.Nucleic acids research · 2003Article
- tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features.RNA (New York, N.Y.) · 2002Article
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1 author.
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Abstract
tmRNA (also known as 10Sa RNA or SsrA) plays a central role in an unusual mode of translation, whereby a stalled ribosome switches from a problematic mRNA to a short reading frame within tmRNA during translation of a single polypeptide chain. Research on the mechanism, structure and biology of tmRNA is served by the tmRNA Website, a collection of sequences for tmRNA and the encoded proteolysis-inducing peptide tags, alignments, careful documentation and other information; the URL is http://www.indiana.edu/~tmrna. Four pseudoknots are usually present in each tmRNA, so the database is rich with information on pseudoknot variability. Since last year it has doubled (227 tmRNA sequences as of September 2001), a sequence alignment for the tmRNA cofactor SmpB has been included, and genomic data for Clostridium botulinum has revealed a group I (subgroup IA3) intron interrupting the tmRNA T-loop.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.