Evidence map›Paper›PMID 11741842›Full record

ArticleJournal of bacteriology2002

Overexpression of the PepF oligopeptidase inhibits sporulation initiation in Bacillus subtilis.

Kyoko Kanamaru, Sophie Stephenson, Marta Perego

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Proteomic Characterization of Virulence Factors and Related Proteins inInternational journal of molecular sciences · 2022
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  11. Identification and Characterization of anFrontiers in microbiology · 2016
    Article
  12. Article
  13. The fusidic acid stimulon of Staphylococcus aureus.The Journal of antimicrobial chemotherapy · 2008
    Article
  14. Article
  15. Article
  16. Article
  17. Proteomic signature of Lactococcus lactis NCDO763 cultivated in milk.Applied and environmental microbiology · 2005
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kyoko KanamaruDivision of Cellular Biology, Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, California 92037, USA.
Sophie Stephenson
Marta Perego
Scripps Research Institute · US

Funding

GENETIC CONTROL OF DEVELOPMENTR01GM019416 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI HOCH, JAMES ALFRED · 1985 to 2015
$10.0M
Protein Aspartate Phosphatases in DevelopmentR01GM055594 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI PEREGO, MARTA · 1998 to 2006
$2.7M
GENETIC CONTROL OF DEVELOPMENTR37GM019416 · NIGMS · SCRIPPS RESEARCH INSTITUTE · PI HOCH, JAMES ALFRED · 1992 to 2001
$1.3M
QTL MAPPING OF ANALGESIC CHARACTERISTICS OF ANESTHETICSF32GM019416 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI SHEN, ELAINE · 1998 to 1999
–
NIGMS NIH HHS F32 GM019416NIGMS NIH HHS GM19416NIGMS NIH HHS GM55594NIGMS NIH HHS R01 GM019416NIGMS NIH HHS R01 GM055594NIGMS NIH HHS R37 GM019416
6 · The paper itself

Abstract

The yjbG gene encoding the homologue of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis (Monnet et al., J. Biol. Chem. 269:32070-32076, 1994; Nardi et al., J. Bacteriol. 179:4164-4171, 1997) has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when present in the cells on a multicopy plasmid. Genetic analysis suggested that the inhibitory effect is due to hydrolysis of the PhrA peptide in a form as small as the pentapeptide (ARNQT). Inactivation of PhrA results in deregulation of the RapA phosphatase and thus dephosphorylation of the Spo0F approximately P response regulator component of the phosphorelay for sporulation initiation. When overexpressed, the B. subtilis PepF is most likely hydrolyzing additional peptides of the Phr family, as is the case for PhrC involved in control of competence development. Chromosomal inactivation of the yjbG/pepF gene did not give rise to any detectable phenotype. The function of PepF in B. subtilis remains unknown. Limited experiments with a yjbG paralogue called yusX indicated that a frameshift is present, making the corresponding gene product inactive.

Indexed as

ATP-Binding Cassette TransportersEscherichia coli ProteinsRepressor ProteinsBacillus subtilisBacterial ProteinsDNA-Binding ProteinsGene Expression Regulation, BacterialGenes, BacterialMetalloendopeptidasesPhosphatesPlasmidsProtein Processing, Post-TranslationalSignal TransductionSpores, BacterialTransformation, BacterialATP-Binding Cassette TransportersBacterial ProteinsComA protein, BacteriaDNA-Binding ProteinsEscherichia coli ProteinsMetalloendopeptidasesmodF protein, E coliOligoendopeptidase FPhosphatesPhrC protein, Bacillus subtilisRepressor Proteins

Identifiers

PMID11741842
PMCPMC134765
OpenAlexW2061838568

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.