Evidence map›Paper›PMID 11741257›Full record

ArticleAAPS pharmSci2001

Genomic structure of proton-coupled oligopeptide transporter hPEPT1 and pH-sensing regulatory splice variant.

A Urtti, S J Johns, W Sadée

Open access · bronzeAbstract read
In one paragraph

Article in AAPS pharmSci, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Protein cold adaptation strategy via a unique seven-amino acid domain in the icefish (Chionodraco hamatus) PEPT1 transporter.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  4. Article
  5. Article
  6. Article
  7. The proton oligopeptide cotransporter family SLC15 in physiology and pharmacology.Pflugers Archiv : European journal of physiology · 2004
    Review
  8. Review
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

A UrttiDepartment of Biopharmaceutical Sciences, University of California San Francisco, CA 94143-0446, USA. Arto.Urtti@messi.uku.fi
S J Johns
W Sadée
University of California, San Francisco · USUniversity of Eastern Finland · FI

Funding

NIGMS NIH HHS GM99004
6 · The paper itself

Abstract

Proton-coupled oligopeptide transporter PEPT1 facilitates the transport of dipeptides and peptoid drugs (including antibiotics) across the cell membranes of endothelial and epithelial cells. Substrate transport by the proton symport is driven by pH gradients, while the profile of pH sensitivity is regulated by a closely related protein, hPEPT1-RF. We investigated the genomic structure of hPEPT1 and hPEPT1-RF. Analysis of the high-throughput genomic sequence (HTGS) database revealed that hPEPT1 and hPEPT1-RF are splice variants encoded by the same gene located in chromosome 13, consisting of 24 exons. hPEPT1 is encoded by 23 exons and hPEPT1-RF by 6 exons. Coding sequences of hPEPT1-RF share 3 exons completely and 2 exons partially with hPEPT1. The genomic organization of hPEPT1 shows high similarity with its mouse orthologue. Exon-intron boundaries occur mostly in the loops connecting transmembrane segments (TMSs), suggesting a modular gene structure reflecting the TMS-loop repeat units in hPEPT1. The putative promoter region of hPEPT1 contains TATA boxes and GC-rich regions and a potential insulin responsive element.

Indexed as

SymportersAlternative SplicingAmino Acid SequenceAnimalsBase SequenceCarrier ProteinsChromosomes, Human, Pair 13HumansHydrogen-Ion ConcentrationMiceMolecular Sequence DataPeptide Transporter 1PeptoidsPromoter Regions, GeneticProtein IsoformsCarrier ProteinsPeptide Transporter 1PeptoidsProtein IsoformsSLC15A1 protein, humanSlc15a1 protein, mouseSymporters

Identifiers

PMID11741257
PMCPMC2751238
OpenAlexW1990259098

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.