Evidence map›Paper›PMID 11739741›Full record

ArticleMolecular and cellular biology2002

Yeast hnRNP K-like genes are involved in regulation of the telomeric position effect and telomere length.

Oleg Denisenko, Karol Bomsztyk

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Fast chromatin immunoprecipitation assay.Nucleic acids research · 2006
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Oleg DenisenkoDivision of Nephrology, Department of Medicine, University of Washington, Seattle, Washington 98195, USA. odenis@u.washington.edu
Karol Bomsztyk
University of Washington · US

Funding

INTERACTION OF K PROTEIN WITH PROTEIN KINASESR01GM045134 · NIGMS · UNIVERSITY OF WASHINGTON · PI BOMSZTYK, KAROL · 1991 to 2007
$2.4M
LAMININ GENE EXPRESSION IN GLOMERULAR CELLSR37DK045978 · NIDDK · UNIVERSITY OF WASHINGTON · PI BOMSZTYK, KAROL · 2003 to 2011
$2.2M
LAMININ GENE EXPRESSION IN GLOMERULAR CELLSR01DK045978 · NIDDK · UNIVERSITY OF WASHINGTON · PI BOMSZTYK, KAROL · 1993 to 2002
$563k
NIDDK NIH HHS DK45978NIDDK NIH HHS R01 DK045978NIDDK NIH HHS R37 DK045978NIGMS NIH HHS GM45134NIGMS NIH HHS R01 GM045134
6 · The paper itself

Abstract

Mammalian heterogeneous nuclear ribonucleoprotein K (hnRNP K) is an RNA- and DNA-binding protein implicated in the regulation of gene expression processes. To better understand its function, we studied two Saccharomyces cerevisiae homologues of the human hnRNP K, PBP2 and HEK2 (heterogeneous nuclear RNP K-like gene). pbp2Delta and hek2Delta mutations inhibited expression of a marker gene that was inserted near telomere but not at internal chromosomal locations. The telomere proximal to the ectopic marker gene became longer, while most of the other telomeres were not altered in the double mutant cells. We provide evidence that telomere elongation might be the primary event that causes enhanced silencing of an adjacent reporter gene. The telomere lengthening could, in part, be explained by the inhibitory effect of hek2Delta mutation on the telomeric rapid deletion pathway. Hek2p was detected in a complex with chromosome regions proximal to the affected telomere, suggesting a direct involvement of this protein in telomere maintenance. These results identify a role for hnRNP K-like genes in the structural and functional organization of telomeric chromatin in yeast.

Indexed as

Silent Information Regulator Proteins, Saccharomyces cerevisiaeAmino Acid SequenceFungal ProteinsGenes, FungalGene SilencingHeterogeneous-Nuclear Ribonucleoprotein KHeterogeneous-Nuclear RibonucleoproteinsHumansMolecular Sequence DataRibonucleoproteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence AlignmentTelomereTrans-ActivatorsFungal ProteinsHEK2 protein, S cerevisiaeHeterogeneous-Nuclear Ribonucleoprotein KHeterogeneous-Nuclear RibonucleoproteinsPBP2 protein, S cerevisiaeRibonucleoproteinsSaccharomyces cerevisiae ProteinsSilent Information Regulator Proteins, Saccharomyces cerevisiaeSIR3 protein, S cerevisiaeTrans-Activators

Identifiers

PMID11739741
PMCPMC134203
OpenAlexW2092212516

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.