Evidence map›Paper›PMID 11733544›Full record

ArticleThe Journal of cell biology2001

Vesicular and nonvesicular transport of ceramide from ER to the Golgi apparatus in yeast.

K Funato, H Riezman

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 214 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Structure of the yeast ceramide synthase.Nature structural & molecular biology · 2025
    Article
  9. Human genetic defects of sphingolipid synthesis.Journal of inherited metabolic disease · 2025
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Sorting of complex sphingolipids within the cellular endomembrane systems.Frontiers in cell and developmental biology · 2024
    Review
  15. Role of sphingolipids in the host-pathogen interaction.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2023
    Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

K FunatoBiozentrum of the University of Basel, CH-4056 Basel, Switzerland.
H Riezman
University of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transport and sorting of lipids must occur with specific mechanisms because the membranes of intracellular organelles differ in lipid composition even though most lipid biosynthesis begins in the ER. In yeast, ceramide is synthesized in the ER and transferred to the Golgi apparatus where inositolphosphorylceramide (IPC) is formed. These two facts imply that ceramide can be transported to the Golgi independent of vesicular traffic because IPC synthesis still continues when vesicular transport is blocked in sec mutants. Nonvesicular IPC synthesis in intact cells is not affected by ATP depletion. Using an in vitro assay that reconstitutes the nonvesicular pathway for transport of ceramide, we found that transport is temperature and cytosol dependent but energy independent. Preincubation of ER and Golgi fractions together at 4 degrees C, where ceramide transport does not occur, rendered the transport reaction membrane concentration independent, providing biochemical evidence that ER-Golgi membrane contacts stimulate ceramide transport. A cytosolic protease-sensitive factor is required after establishment of ER-Golgi contacts.

Indexed as

Adenosine TriphosphatasesSaccharomyces cerevisiae ProteinsVesicular Transport ProteinsAdenosine TriphosphateBiological TransportCarrier ProteinsCell-Free SystemCeramidesCOP-Coated VesiclesCytoplasmic VesiclesCytosolEndoplasmic ReticulumFungal ProteinsGlycosphingolipidsGolgi ApparatusGTPase-Activating ProteinsAdenosine TriphosphatasesAdenosine TriphosphateCarrier ProteinsCeramidesFungal ProteinsGlycosphingolipidsGTPase-Activating ProteinsGuanine Nucleotide Exchange FactorsinositolphosphoceramidesMembrane GlycoproteinsMembrane ProteinsSaccharomyces cerevisiae ProteinsSEC12 protein, S cerevisiaeSEC16 protein, S cerevisiaeSEC17 protein, S cerevisiaeSEC18 protein, S cerevisiaeSEC23 protein, S cerevisiaeSoluble N-Ethylmaleimide-Sensitive Factor Attachment ProteinsSphingolipidsVesicular Transport Proteins

Identifiers

PMID11733544
PMCPMC2150913
OpenAlexW2063968358

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.