Evidence map›Paper›PMID 11720287›Full record

ArticleRNA (New York, N.Y.)2001

Cellular mutants define a common mRNA degradation pathway targeting cytokine AU-rich elements.

G Stoecklin, P Stoeckle, M Lu, O Muehlemann, C Moroni

Open access · greenAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 102 citations in OpenAlex.

  1. Article
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  10. Translating the Untranslated Region.Journal of immunology (Baltimore, Md. : 1950) · 2015
    Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. MAPK usage in periodontal disease progression.Journal of signal transduction · 2012
    Article
  16. The role of tristetraprolin in cancer and inflammation.Frontiers in bioscience (Landmark edition) · 2012
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

G StoecklinInstitute of Medical Microbiology, University of Basel, Switzerland.
P Stoeckle
M Lu
O Muehlemann
C Moroni
University of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To functionally classify AU-rich elements (AREs) from six different cytokine mRNAs, we made use of two previously described HT1080-derived cellular mutants (slowA, slowC) that lack a function required for the rapid degradation of interleukin-3 (IL-3) mRNA. Here we show that the defect is specific for ARE-containing mRNAs, whereas nonsense-mediated decay is intact. Degradation of beta-globin reporter transcripts mediated by the AREs of IL-3, GM-CSF, and TNFalpha, as well as by the structurally different and less potent AREs of IL-2 and IL-6, is impaired in both mutants. All these reporter transcripts are also sensitive to decay induced by ectopic expression of the RNA-binding protein tristetraprolin in the slowC background. Thus, we concluded that the mutants slowA and slowC define a common mRNA degradation pathway that targets cytokine AREs. In NIH3T3 cells, this decay pathway becomes incapacitated by upstream signaling from p38 MAP- or PI3-kinases, which independently stabilize cytokine ARE-containing transcripts. In contrast, c-fos ARE-directed mRNA degradation proceeds through a different pathway not affected by these kinases.

Indexed as

DNA-Binding ProteinsResponse Elements3T3 Cells3' Untranslated RegionsAnimalsBase SequenceCodon, NonsenseCytokinesEnzyme ActivationGranulocyte-Macrophage Colony-Stimulating FactorHumansImmediate-Early ProteinsInterleukin-2Interleukin-3Interleukin-4Interleukin-63' Untranslated RegionsCodon, NonsenseCytokinesDNA-Binding ProteinsGranulocyte-Macrophage Colony-Stimulating FactorImmediate-Early ProteinsInterleukin-2Interleukin-3Interleukin-4Interleukin-6Mitogen-Activated Protein Kinasesp38 Mitogen-Activated Protein KinasesPhosphatidylinositol 3-KinasesRNARNA-Binding ProteinsRNA, MessengerTristetraprolinTumor Necrosis Factor-alphaZFP36 protein, humanZfp36 protein, mouse

Identifiers

PMID11720287
PMCPMC1370200
OpenAlexW2130276974

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.